KEGG   Ferrovum myxofaciens: HO273_11755
Entry
HO273_11755       CDS       T06614                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
fmy  Ferrovum myxofaciens
Pathway
fmy03030  DNA replication
fmy03430  Mismatch repair
fmy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HO273_11755 (dnaE)
   03430 Mismatch repair
    HO273_11755 (dnaE)
   03440 Homologous recombination
    HO273_11755 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fmy03032]
    HO273_11755 (dnaE)
   03400 DNA repair and recombination proteins [BR:fmy03400]
    HO273_11755 (dnaE)
Enzymes [BR:fmy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HO273_11755 (dnaE)
DNA replication proteins [BR:fmy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HO273_11755 (dnaE)
DNA repair and recombination proteins [BR:fmy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HO273_11755 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon Fox-1_C
Other DBs
NCBI-ProteinID: QKE39301
Position
complement(2459769..2463230)
AA seq 1153 aa
MSAPPFIHLRLHSEFSISDGLVRIDEAVELARSLNMGALALTDLNNLFGWVRFYLQARKA
GLKPIAGAEVWIASDEDHPHPFRIVLLARTLPGYHTLCRLLSAAWREHQAQGIAYVPLAL
LAQEKEGLLVLSGADQGDVGQALSAGQWDLARERALAWKTRWGDDYYLELQRIGDPMRDR
LCEPTVQLAAELDIPVVATHPIQFPAREDFKAHEARVCIAEGRLLADPKRPRLFTPEQYF
KSPDEMAELFRDIPAALANSVEIARRCSLELTLGKPRLPDFPTPDGITLDDFLRQQAHEG
LERRLAQLYPDETLRQKETATYRERLDFECQTIVQMGFPGYFLIVADFINWSKHHGVPVG
PGRGSGAGSLVAFSLGITDIDPLRYDLLFERFLNPERVSMPDFDIDFCQDGRDRVIDYVR
ERYGRDSVAQIATFGTMAAKAVIRDVGRVLDLPYNFVDQLAKLIPFEIGMTLAKAREQEP
QINQRAAQEEEVAELLTLAESLEGLTRNVGMHAGGVLIAPGKLTDFTPLYQPEGSEAVVS
QYDKDDVEKVGLVKFDFLGLRTLTILDWAVRHIQERARTPEERHFTVEQIPLDDSKTYAL
FGSGNTTAVFQQESRTAKDMEKRLKPDNFEDIIALMALNRPGPLQSGMVDDFILRKQGKA
VAEYFHQSLEPVLRPTYGVIVYQEQVMQIAQILAGYTLGAADLLRRAMGKKDAVEMGRQR
SRFIEGATTRGVGVKLATQLFDLMEKFAEYGFNKSHSAAYALISYQTAWLKTHYPAEFMA
ATLSGDLDDTDKVALFVADAQQNGLVILPPDINTSDYRFRPAGEKTIRYGLGSVKGTGEG
AALEILRQRSGSPPEPYRSLFDFCRRTDKRSVNRRVIEALIKAGAFDTLHPNRAAALNAV
ESALNHGEQAQRHALQEGLFDALAESASKDPPLPPHPEWSPNEQLTQEKSVLGYYFSGHP
FTHYRPQLQHWGLTPLDQLAPRAELIRVAGVVVQSRVQQTRRGRMGMVTLDDGSARVEIT
VFSELFDQVRPLLKEDRLLVVEGKATLDNFTQGVRLTAEQVLSLPQAQTRFARQITLEVS
HSQSAKTLALLKELKPSFQPGSCAFVLRYCRPEVEASLRLPDFQLDEALWDLFRARFGET
ALTLDYGNRPTNE
NT seq 3462 nt   +upstreamnt  +downstreamnt
gtgagcgcgcctcctttcatccatctgcgcctgcacagcgaattctccatttctgacggc
ctggtgcgcatcgacgaagccgtggaactggcgcgctccctgaatatgggggccctggcc
ctgaccgatctcaacaatctgttcggctgggttcgtttctacctgcaggcccgcaaggcc
ggcctcaaacccattgccggcgcggaagtctggatcgcttcggacgaagaccacccccat
cctttccggatcgtcttgctggcacgcacgctccccggctaccacacgctctgtcgcctg
ctgtcggcagcctggcgcgaacatcaggcacagggcattgcttatgtgccccttgccctg
ctggcccaggaaaaagaaggacttctggtcctctccggggcggaccagggagatgtgggt
caagccctgagtgcggggcagtgggacctggcccgggaacgggccctggcctggaaaacc
cggtggggggatgactactatctggaacttcagcggatcggcgacccgatgcgcgaccga
ctctgcgaacccacggtccaactggctgctgaactggatattcccgtggtcgccacccac
cccatccagtttcccgcacgagaggatttcaaggcccatgaagcccgcgtgtgtatcgcg
gaaggtcgcctgctggcagatccaaaacgcccgcgtctttttaccccggagcagtatttc
aagtccccggacgaaatggccgaactgtttcgtgacattcctgcagcccttgccaactcg
gtggaaattgcacgccgctgttctctggaattgacgctggggaagccccgtcttcccgat
ttccccacccccgacggcatcaccctcgacgattttctgcgccagcaggcccacgagggc
ctggaacgccgcctggcacaactgtatcccgatgaaaccctgcgccaaaaagaaaccgcc
acctatcgggaacgtctggatttcgagtgccagaccatcgttcagatgggatttcccggc
tatttcctgatcgtggcagactttatcaactggtccaaacatcatggcgtgccggtgggc
cctggacggggatcgggggcaggatcactggtcgctttcagcctggggatcaccgatatc
gatcccttgcggtatgacctgctcttcgagcgcttcctcaacccggaacgggtatccatg
cctgactttgatatcgatttctgtcaggacggacgggaccgggtcatcgactatgtcagg
gaacgctacggacgggattctgtagcccagatcgccaccttcggtaccatggcggccaag
gccgtgattcgggatgtcggacgggtactggatctaccctataattttgtggaccaactg
gccaagctgatccccttcgaaattggcatgaccctggccaaggcccgggaacaggaaccc
cagatcaaccagcgcgctgcccaggaagaagaggtcgccgaattgctgaccctggccgaa
tccttggaaggtctcacgcgcaatgtcggcatgcacgcgggaggcgtgctgattgccccc
ggcaaattgactgacttcaccccgctctaccagcccgaaggttcggaagccgtagtcagt
caatacgacaaggacgatgtggaaaaggttggcctggtcaagttcgactttttggggttg
cgcaccctcaccattctcgattgggcggtgcgccatatccaggaacgggcgcgcaccccc
gaggaacggcacttcacggtagaacagattcccctggacgattccaaaacctatgcgctc
ttcggcagtggcaacaccaccgccgtcttccagcaagaatcgcgcacagccaaggatatg
gaaaaacggctcaaacccgacaactttgaggacatcatcgccctgatggccttgaatcgt
ccggggccgctccagtccggcatggtggatgacttcattctgcgcaaacagggcaaggcc
gtcgccgaatatttccaccaatccctggaaccggttttacgccccacctacggagtcatc
gtctatcaggagcaggtgatgcagatcgcccagatcctggcaggctataccctgggggcc
gccgatctgttacgtcgcgccatgggaaaaaaggatgcggtggaaatgggtcggcagcgc
agtcgtttcatcgaaggagccaccacccgtggagtcggtgtcaagttggccacccaactc
ttcgatctgatggaaaagtttgccgaatatgggttcaacaaatcccattcggccgcctat
gccctgatttcctatcagaccgcttggctcaagacccattaccctgccgaattcatggcc
gccaccctgtccggagatctggacgacaccgacaaggtcgcgctcttcgtggccgatgct
cagcaaaatggattggtcattctgcccccggacatcaatacgtcggattaccgttttcgt
cccgccggggaaaaaaccatccggtatggcctcggctcggtcaagggtacgggggaaggg
gcggctcttgaaatcctcaggcaacgcagtggctccccccctgaaccctatcgaagtttg
tttgatttctgccggcggacggacaaacgcagcgtcaatcgtcgggtcatcgaagccttg
atcaaggcgggagccttcgataccctgcaccccaaccgcgccgccgccctcaatgctgtg
gaatctgctctcaatcatggggaacaggcccagcgtcatgccctgcaagaaggtctgttt
gatgcgctggcagaatcggcctcgaaggaccctcccctgcccccccatcccgagtggtca
cccaacgagcaactgacccaggaaaaatccgtgctgggctattacttcagcggtcacccc
tttacgcactaccgtccccaactccagcactggggattgacccctctggatcagttggcc
ccccgtgccgagttgattcgggtggccggagtggtggtacagagcagggtccagcaaacc
cggcgcggacgcatgggaatggttaccctggatgatggttcggcccgtgtggaaatcacc
gtattcagtgaattatttgatcaggtacggcccctgctcaaggaagatcgactgctggtg
gtggagggtaaggcaaccctggacaacttcacccagggggtgcgactcaccgccgaacag
gtcctgtccctaccccaggcccagactcgctttgcgcgccagattaccctggaagtttcc
cacagccaaagcgcaaaaacccttgctctcctgaaagaactgaagccttccttccagccc
ggttcctgtgcttttgtgctgcgctactgccgtcccgaggtggaggcttccctccgtctg
cctgactttcaactggatgaagccttatgggatctgttccgtgcacgctttggcgagacc
gccttgaccctcgattatggaaatcgcccgaccaacgaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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