KEGG   Fusarium oxysporum: FOXG_05329
Entry
FOXG_05329        CDS       T04882                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
fox  Fusarium oxysporum
Pathway
fox03022  Basal transcription factors
fox03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FOXG_05329
  09124 Replication and repair
   03420 Nucleotide excision repair
    FOXG_05329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fox03021]
    FOXG_05329
   03400 DNA repair and recombination proteins [BR:fox03400]
    FOXG_05329
Transcription machinery [BR:fox03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FOXG_05329
DNA repair and recombination proteins [BR:fox03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FOXG_05329
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 28947310
NCBI-ProteinID: XP_018240503
UniProt: A0A0J9UU81
Position
7:1915352..1917600
AA seq 78 aa
MPRAIRGVLIECDPSIKSIIVSIDSANHDYIIEDLDDERVVVKETMVSTLKHKLEEVRSI
ASIIFTQATCDWKWALFD
NT seq 237 nt   +upstreamnt  +downstreamnt
atgcctcgtgcaatcagaggcgttcttatcgagtgcgatccttcgatcaagtccatcatc
gtcagcatcgacagtgctaaccatgactacatcattgaggatctcgatgatgaacgcgtg
gttgtgaaagagaccatggtctcaacgctcaagcataagctcgaagaagtacgttcgatt
gctagcatcatcttcacccaagctacttgcgactggaaatgggctttgtttgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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