KEGG   Flavobacterium pallidum: HYN49_04190
Entry
HYN49_04190       CDS       T06077                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpal  Flavobacterium pallidum
Pathway
fpal03410  Base excision repair
fpal03430  Mismatch repair
fpal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HYN49_04190 (recJ)
   03430 Mismatch repair
    HYN49_04190 (recJ)
   03440 Homologous recombination
    HYN49_04190 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpal03400]
    HYN49_04190 (recJ)
DNA repair and recombination proteins [BR:fpal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     HYN49_04190 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HYN49_04190 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HYN49_04190 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AWI25158
UniProt: A0A2S1SFH2
Position
1015070..1016761
AA seq 563 aa
MRWTLQPSPEPEKVQSLSQTLNIDPLVARLLVQRGIETYEDARKFFRPSLDDLHNPYLMK
DMDKAVLRIEKAIENGENILVFGDYDVDGTTAVSLVSSYLKTIYPNVATYIPDRYAEGYG
ISYTGIDYADDNGVSLIIALDCGIKSIDHVAYAKEKNIDFIICDHHRPGDILPDAVAVLD
PKRTDCHYPYDELCGCGVGFKLIQALGAERGQTIDDLLPYLDLVAVAIAADIVPITGENR
ILAHFGLQVINSFPRNGIKALVYLSKKQKLDITDVVFILAPRINAAGRIRHGNHAVELLT
EADFDQAVLYASEIEKYNADRKELDKQITMEALAQIEENNEQEHFTTVVFKDSWHKGVIG
IVASRLIETYYRPTIVFTESGEKYAASARSVSGFDVYDALEHCAEHLEQFGGHKYAAGMT
LKKENYAAFKNAFEQCVRATIPQELLTPEIRIDAEIDFSEITPKLTRILKQFEPFGPMNM
APVFVSRNVTDTGYAKKLGNDESHLKLFLKQGNSEGFGAIGFGLGKKIDVASEKKPFDVV
FCIDENQWNGTVSVQLRVKDIGN
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgcgctggacactccaaccctcacccgaacctgaaaaggtacaatcgctttcacaaacc
ttgaacattgatccgcttgtggcaagattgctggtacaacgcggcatcgaaacctatgaa
gatgcgcggaaatttttccggccaagcctcgacgacctgcacaatccgtacctgatgaag
gacatggacaaggcagttttacggattgaaaaagcgattgaaaacggcgagaacatcctg
gttttcggggattatgacgtggatggcacgacggcggtctcgttggtttcttcgtattta
aagaccatttacccgaatgtggcgacgtacattccggatcgttatgcggaaggttacggc
atttcgtacaccggtatcgattatgccgatgacaatggcgtttcactgattattgcgttg
gattgcggcataaaatccatcgatcacgttgcttacgcaaaagaaaaaaacatcgatttc
atcatttgcgaccaccaccgcccgggcgatattttgcctgatgcggtggcggttctggat
ccgaaaagaaccgattgccattatccgtatgatgaactttgcggttgtggggtcgggttt
aagctgatccaggccctcggcgccgaacgcgggcaaacgattgatgatttgctgccgtac
cttgacctggttgctgtggcgattgccgccgatattgtgccgattacgggcgaaaacagg
attttggcgcatttcggattgcaggtgatcaattcgttcccgaggaatgggatcaaggct
ttggtgtatttatccaaaaagcaaaaactcgacatcaccgatgtggtgttcattcttgcc
cctaggatcaatgcggcgggaaggatccgccacgggaaccatgcagtggaattattgacc
gaagccgattttgaccaggctgttttatacgcttcggaaattgaaaaatacaacgctgac
cgcaaggaactcgacaagcagatcacaatggaggctttggcacaaattgaggaaaataac
gagcaggagcattttacgacagtggtttttaaagacagctggcataaaggcgtgattggt
atcgtcgcgtcacgattgattgaaacctattaccgcccgacgatcgtgtttacggaatcg
ggtgaaaaatatgccgcttcggcgaggtccgtgagcggattcgacgtgtatgatgctttg
gaacactgtgcggaacacctcgagcaattcggagggcataaatatgcggcgggcatgacg
ttgaaaaaggaaaactatgccgctttcaaaaacgcattcgagcagtgtgtgcgtgcgacg
attccgcaggaacttttaacgccggaaatcaggattgacgcggaaatcgatttttcggaa
attacgccgaagctgacccggatattgaaacagttcgaaccgtttggcccgatgaatatg
gcaccggttttcgtaagccggaatgtcaccgataccggctatgcgaagaaactcggcaat
gacgaatcgcacttaaaactgtttctcaaacagggaaattcggagggtttcggggcgatt
ggtttcgggttgggcaaaaaaattgatgtggcttcagaaaagaaaccgttcgatgtggtt
ttttgcattgatgaaaatcagtggaacggaacggtaagcgtgcagttacgggttaaggat
attggtaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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