KEGG   Flavobacterium psychrophilum CSF259-93: FPSM_00821
Entry
FPSM_00821        CDS       T03254                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
fpc  Flavobacterium psychrophilum CSF259-93
Brite
KEGG Orthology (KO) [BR:fpc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpc03032]
    FPSM_00821
   03400 DNA repair and recombination proteins [BR:fpc03400]
    FPSM_00821
Enzymes [BR:fpc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     FPSM_00821
DNA replication proteins [BR:fpc03032]
 Prokaryotic type
  DNA Topoisomerases
   FPSM_00821
DNA repair and recombination proteins [BR:fpc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FPSM_00821
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim HC2
Other DBs
NCBI-ProteinID: AIJ37316
UniProt: A0A076NY85
Position
916599..919115
AA seq 838 aa
MAKNLVIVESPAKAKTIEKFLGADFQVESSYGHIADLPSKEIGVDVLNGFTPKYEVSPDK
KALVTKLKGLAKKADMVWLASDEDREGEAISWHLAEELKLDPKKTKRIVFHEITKTAILK
AIENPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVERER
EIINFKPVATYSVQAEFTNEAGKSFKAKLPKNFNTKKEAEDFLNKNIGSIYKVGDLETKP
TKKTPAGPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKDAMEAA
QAEIIKSYGKEYAKPRTFVNKSKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMADAELERTNVKIEANNHSELFTASGEVIKFEGFLKVYLEGHDDDEEEQEGMLPSMK
VNEKLINNYITATERYSRAAARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGN
LEGQERNYTQLTLQSGKVGEKLLKENTGSDKGKLVPTDIGTIVTDFLVKNFDNILDYNFT
AKVEQDFDEIAEGNMQWAKMMQDFYDKFHPTVKDVEANADRESGERILGIDPKSGKPVSV
RLGKFGPMAQIGAADDEEKTFASLLKEQNIGNITLEEVLKLFLLPKNLGTYKGEEIEVSN
GRYGPFIRFGTTFVSLPKGEEPLNVDLNRAQELIDEKLLADAPIAVYKGEGVQKGTGRFG
PFLKWNGIFINVSTKYNFNNLSQQDIETIIEDKIQKNIDKVIHNWEAEGILVQKARWGRS
EITKGKIKIELSKDFDAAKLTLAEAQEMIAKKTPVKKAPVKKAVAKKPAVKKLVAKKN
NT seq 2517 nt   +upstreamnt  +downstreamnt
atggcaaagaatttagtaatagtcgaatcacctgcaaaggcaaaaacaatcgaaaaattt
cttggagcagattttcaagtagaatcaagttatgggcatattgccgacttgccttctaaa
gaaataggagtcgatgtgttaaacgggtttacacccaaatacgaagtttcgcccgacaaa
aaagccttggttaccaaacttaaaggacttgctaaaaaagccgatatggtttggttagct
tccgatgaggatcgcgagggagaagccatttcttggcatcttgccgaagaactaaaacta
gatcctaaaaaaacaaagcgtattgtttttcacgaaattacaaaaacagctattctaaaa
gcaatagaaaatccacgtgaaatagattataatttagttaacgcacaacaagcgcgtcgt
gttttagacagattagtgggttacgaattatcgccagtattgtggcgaaaaattaaaggt
ggattgtcggctggtcgggtacaatcagtttcagttcgattaattgtagagagagaacga
gaaatcatcaatttcaaaccagttgctacatattctgttcaagccgaatttactaacgaa
gctggtaagtcattcaaagcaaaactgcctaaaaattttaacacaaaaaaagaagccgaa
gattttttaaataaaaatattgggtctatatataaggtaggagatctagaaacaaaacct
accaagaaaacaccagcgggaccttttaccacttcgactttgcaacaagaagccgctcgt
aaattgtatttgccagtgggaataaccatgcaattagcacaacggttgtacgaagcagga
cttattacttatatgagaacagatagtgtaaacttatctaaagatgcgatggaagcagct
caagctgaaatcattaaatcttacggaaaggaatatgctaaaccgagaacttttgttaat
aaaagcaaaggtgcacaggaagctcacgaagcgattcgtcctacggatatgtcgcgccat
acggtaaatatcgaccgagatcaagcacgtttgtatgatttaatttggaaaagaacatta
gcatctcagatggctgatgccgaattggaacgtaccaatgttaaaatagaagccaataat
cattcagaactttttacagcctctggagaagtaattaagtttgaaggatttctaaaagta
tatttagaaggacatgatgatgacgaagaagaacaagaaggaatgttgccttcgatgaaa
gtaaatgaaaaattaataaataattatattactgctaccgaaagatattctcgtgcagca
gcaagatataccgaagcttctttggtaaaaaaattagaagaattaggtatcggtcgtcca
tctacttatgcgccaacaatttctacaattattaatagaaattatgtcgaaaaaggaaat
ttagaaggccaagaaagaaattatacccaactaacacttcaatcgggtaaagtaggagag
aagttgctcaaagaaaatacaggatcagataaaggaaaattagttcccacagatattggt
acaattgtaacagatttcctagtgaagaatttcgataatattcttgattataattttact
gccaaagtagaacaagatttcgacgaaattgcagaaggaaacatgcagtgggcaaaaatg
atgcaggatttttatgataaatttcaccccacagtaaaagatgtcgaagctaatgccgat
agagaatcgggcgaaagaattttaggaatagatccaaaatctggaaaaccagtttctgtc
cgtttgggtaaatttggacccatggcacaaattggcgctgccgatgacgaagaaaaaaca
ttcgcaagtttgttgaaagagcaaaatataggcaacattactttagaagaagtattaaaa
ttatttttacttccaaaaaatcttgggacttataaaggagaagaaatcgaggtttcaaac
gggcgttatggtccttttattcgtttcggaaccacctttgtttccttgccaaaaggagaa
gaaccattaaatgttgatttaaatagagcccaagaattaatagacgaaaagttactagct
gatgcacctattgcagtttataaaggcgaaggcgttcaaaaaggaacaggtcgttttggc
cctttcttaaaatggaatggtattttcatcaatgtcagtacaaaatataattttaacaat
ttgtcgcaacaagatattgaaacgattatcgaagataaaattcaaaaaaacatcgataag
gtaattcataattgggaagctgaaggtattttggttcaaaaagcccgttggggaagatct
gaaattaccaaaggaaaaataaaaattgaactaagtaaagattttgatgctgcaaaatta
accttagcagaagcacaagaaatgattgctaagaagacaccagtaaaaaaggcaccagta
aaaaaagcagtggcaaaaaaacctgctgtgaagaaattagtcgcaaaaaagaactaa

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