KEGG   Flavobacterium psychrophilum CSF259-93: FPSM_01304
Entry
FPSM_01304        CDS       T03254                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
fpc  Flavobacterium psychrophilum CSF259-93
Pathway
fpc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fpc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FPSM_01304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpc03400]
    FPSM_01304
DNA repair and recombination proteins [BR:fpc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FPSM_01304
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FPSM_01304
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 SWI2_SNF2 DUF87 AAA_7
Other DBs
NCBI-ProteinID: AIJ37799
UniProt: A0A075RKZ5
Position
1445560..1447551
AA seq 663 aa
MNFQVQSDYKPKGDQPQAIEKLVQGITDNEKYQTLLGVTGSGKTFTVANVIQEVQRPTLV
LAHNKTLAAQLYSEFKQFFPNNAVEYFVSYYDYYQPEAFMPVTGVFIEKDLSINEELEKM
RMSTVSSLLSGRRDIIVISSVSCLYGIGNPVEFQKNVIPIEKGQIISRTKLLHQLVQSLY
SRTEMDFMPGNFRIKGDTVDIYPSYADDAFRIHFFGDEIEEIESFDVKTTQVIEKFEKLT
IYPANMFVTSPDVLQNAIWEIQQDLVKQVDYFKEIGKHLEAKRLEERTNFDLEMIRELGY
CSGIENYSRYLDGRSTGTRPFCLLDYFPKDYLMVVDESHVTLSQVHAMYGGDRSRKENLV
EYGFRLPAAMDNRPLKFEEFEAMQNQVIYVSATPADYELQKTDGVVVEQVIRPTGLLDPI
IEIRPSLNQIDDLIEEIQVRAEIDERVLVTTLTKRMAEELAKYLTKVNIRCRYIHSEVDT
LERIEIMQDLRKGIFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTIGRA
ARNLNGKAIMYADKITASMQKTIDETNYRREKQINFNIANNIIPQALNKKIESAFTKNTL
VDSELGYTSGNMAAEPETEYLSKPEIEKRIRDKRKAMEKAAKDLDFMQAAKLRDEIKDLQ
EKI
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaacttccaagtacaatcagattacaaacccaaaggtgaccaaccacaagcaattgaa
aaattagtgcaaggcattaccgataacgaaaaataccaaactctactaggcgttacgggt
tctggaaaaacatttaccgttgccaatgtaattcaagaagtgcaaagaccaactttagtt
ttagcccataacaaaacgctggcagcacaattatattcagaatttaaacagttttttcct
aataatgcggtcgaatattttgtatcgtactacgactattatcagcctgaagcatttatg
ccagttactggtgtttttatcgaaaaagatttatctattaatgaggaattagaaaaaatg
cgaatgagtaccgtttcttcattgctttcaggacgacgtgatattattgtaatatcttct
gtttcttgtctttacggtattggtaatcctgtcgagtttcaaaaaaatgtaattcctatc
gaaaaaggtcaaatcatatctaggactaaattattacaccaactcgtgcaaagtttatat
tcacgtaccgaaatggattttatgcctggaaattttagaataaaaggagataccgtagat
atatatcctagttatgccgatgatgcttttcgaattcatttttttggtgatgaaatagaa
gaaattgaaagttttgatgtaaaaacaactcaagttatcgaaaaatttgaaaaactaacc
atatatcctgccaatatgtttgtgacttcgcccgatgtgttgcaaaatgccatttgggaa
attcagcaagatttggttaaacaagtcgattatttcaaagaaataggtaagcatctcgaa
gcaaaacgactagaagaacgtactaatttcgatttagaaatgattcgagaattgggttat
tgctctggaatagaaaattattcaagatatttagacgggcgaagtacaggaacacgacct
ttttgtttacttgattattttccaaaagattacctaatggttgtagacgaaagtcatgtc
acactctcgcaagtgcacgctatgtatggtggcgaccgttctcgcaaagaaaatttagtc
gaatacggtttccgattgcccgccgctatggacaatcgtccgcttaaatttgaagaattt
gaagccatgcaaaaccaagttatttatgtatcggcaacaccagcagactatgagttgcaa
aaaacagatggagttgtggtagagcaagtcattcgtcccacaggattattagatccaatt
atcgaaattcgtccgagcttaaatcaaatagatgatttgatagaagaaattcaggttcgt
gccgaaatagacgaacgtgttttggttaccacattaaccaaaagaatggcagaagaattg
gcaaaatatttaacaaaagtaaatattcgttgtcgctatattcattcagaagtagatact
ttagaaagaatagaaattatgcaagatttacgaaaaggaattttcgatgtgttaattggt
gttaatttacttcgtgaaggactagatttacccgaggtttctctagttgctattttagat
gctgacaaagaaggtttcctgcgaagtcatcgttcacttacacaaactataggccgtgcg
gcaagaaacctaaacggaaaagcaattatgtatgccgataaaataacggctagcatgcaa
aaaacaatcgatgaaaccaattatcgcagggaaaaacaaattaattttaatattgcaaat
aatattattccgcaggcattaaacaaaaaaattgaaagtgcttttacaaaaaatacattg
gtcgattctgaattaggctacacttctggaaatatggctgctgaaccagaaacagaatat
ttaagcaaaccagaaatagagaaacgtattcgtgataagcgaaaagctatggaaaaagca
gcaaaagatttagattttatgcaagcagctaaattgcgagatgaaattaaagatttgcaa
gaaaaaatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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