KEGG   Flavobacterium psychrophilum CSF259-93: FPSM_01463
Entry
FPSM_01463        CDS       T03254                                 
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
fpc  Flavobacterium psychrophilum CSF259-93
Pathway
fpc00300  Lysine biosynthesis
fpc00470  D-Amino acid metabolism
fpc00550  Peptidoglycan biosynthesis
fpc01100  Metabolic pathways
fpc01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:fpc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FPSM_01463
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FPSM_01463
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FPSM_01463
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    FPSM_01463
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:fpc01011]
    FPSM_01463
Enzymes [BR:fpc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     FPSM_01463
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     FPSM_01463
Peptidoglycan biosynthesis and degradation proteins [BR:fpc01011]
 Precursor biosynthesis
  Amino acid ligase
   FPSM_01463
  Racemase
   FPSM_01463
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M Mur_ligase_C
Other DBs
NCBI-ProteinID: AIJ37958
UniProt: A0A076NWF4
Position
1620534..1622987
AA seq 817 aa
MDPLTISLHNIIPILDANFQGIDENIYYDTISIDSRSLQNNENTLFFALVGPNNDAHIYI
GDLISKGVKNFVVTYIPKRLTGKANFLIVKNTLVALQIFARYYRNLFHFPIIGITGSNGK
TIVKEWLNFLLSPDYNIIRSPKSYNSQVGVPLSVIAINENHNLGIFEAGISTKDEMENLQ
KIIQPTIGILTNIGTAHDEGFADISEKIKEKLKLFTAVEVLILNKNKTIETFINKEINTF
TWSTNDQSADVFFQKKTLNDHALLNITNQGKYFKIKIPFIDEASLENSMHCILVMLYLKY
DLDTIKHRISQLFPVEMRLKVKNGINNCTLIDDSYSSDFQSLKIALDFLENQKQHLKKTL
ILSDIYQSGLENEDLYVRVSQLIISNKINRVICIGGVISKYKNKFLNVISYLSTNDFIED
FDNLDFTNETILIKGSRHFEFEKIVTLLEEKTHETVLEINLNAISHNLNYFKSKLNPKTK
IMVMVKAFGYGSGSFEIAKLLAHHKVNYLGVAFADEGIELRQAGIQLPIMVLNPEMTSFP
SIIQYNLEPEIYSIRGLKAFIKITQQKELTSYPIHIKINTGMNRLGFDAQIIPELISILQ
KHDSVLVKSILSHLAASDDLAQDIFTRKQISDFDTISNKITTKLKINPIRHISNTSAISN
YPQAQFDMVRLGIGLYGVSNDANETKKLENVGTLKSIISQIRNLNSGQSVGYNRRFMVKK
PTTIATIPIGYADGISRAWGNEVGYVLVNEQKAPIVGSICMDMLMIDVTKINCSEGNQVI
IFGKTPSVTTIAKATKTIPYEILTSISSRVKRVFYRE
NT seq 2454 nt   +upstreamnt  +downstreamnt
ttggacccattgactatatccttacacaatataattcctattctagatgccaattttcag
ggtattgacgaaaatatttactacgatactatctcgatagatagtcgttcgcttcaaaac
aacgaaaacactttgttttttgcactagttggtcctaataatgatgcccatatttatatt
ggagatttaatctccaaaggtgttaaaaactttgtagttacctatattcctaaaagatta
actggcaaagcaaattttttaattgtaaaaaacactcttgtagctttacaaatatttgcc
cgttattatcgtaatttatttcattttccaatcataggaattacaggaagcaacggaaaa
accattgtaaaagaatggcttaatttcttattaagtcctgattataatataattagaagt
cctaaaagctacaattcgcaagttggcgttcccctttctgtgattgcaattaatgaaaat
cataatttaggcatttttgaagccggaatttctaccaaagacgaaatggaaaatcttcaa
aaaataatacagccaaccattgggattttaaccaatatagggaccgctcatgatgaaggt
tttgctgatatttctgagaaaataaaagaaaaactcaagctatttactgccgtagaagtt
ttaattcttaataagaataaaaccatcgaaacttttattaacaaagagattaatactttt
acttggagtacaaatgatcagtctgccgatgttttttttcagaaaaaaacactcaatgat
catgctcttttgaatattacaaatcaggggaaatattttaaaataaaaattccatttatt
gatgaagcttcactagaaaacagcatgcattgcattttggtaatgttatatttgaagtat
gatttagatacaattaagcatcgtatttctcaattatttccagtcgaaatgcgattgaag
gtaaaaaacggaattaacaattgtactttaattgatgatagttatagttctgattttcag
tctttaaaaatagctttagattttcttgaaaatcaaaaacaacacttaaaaaaaacactc
attttatcagatatttatcagtcaggattagaaaacgaagacttatatgttcgtgtttct
cagcttattatttcaaacaaaataaatcgagtaatttgcattggaggtgtaatttctaaa
tataaaaacaagtttctcaatgtcatttcttacctttcaacaaatgattttattgaagat
tttgacaatctagattttacaaacgaaactattttaataaaaggatctcgacatttcgaa
ttcgaaaaaattgtaaccttactcgaggaaaaaacacatgaaacagttttagaaattaac
cttaatgccataagccataatttaaattacttcaaatcgaaactaaatcccaaaaccaaa
atcatggttatggtaaaagcttttggttacggaagtggctcatttgagattgccaaactc
ctcgcccaccacaaagtaaattatcttggtgtggcattcgccgatgaaggaatcgaactc
cgccaagcaggcattcaattacctatcatggttctaaatccagaaatgaccagtttccca
tcgataattcaatacaatttagaacccgaaatatatagtattcgaggtctgaaagcattt
ataaaaattacccaacaaaaagaacttaccagttatcctatacatattaagataaataca
ggtatgaatcgtttgggttttgatgcgcaaattattccagaactcatctcaatattacaa
aagcatgattcagttttggtaaaaagtattttgtctcatttagcggcaagcgatgattta
gcacaggatatttttacccgaaaacaaatttcagattttgatacaatatctaataaaatt
accacaaaattaaaaataaaccctattcgccatatttcaaacacctctgcaataagcaat
tatccgcaagcgcagtttgatatggttcgattaggcattgggttatatggcgtttctaat
gatgccaatgaaacaaaaaaacttgaaaatgtagggacactaaaatcgataatttcacaa
attcgcaatttaaacagtggccaaagcgtagggtataatagaaggtttatggtaaaaaaa
cctaccacaattgctacaatcccaataggctatgccgacggaatttcacgtgcttgggga
aatgaagttggttatgttttagttaatgaacaaaaagcccccatagtaggaagtatttgt
atggatatgctaatgatagatgtcacaaaaattaattgttctgaaggtaatcaagtaatt
atctttggcaagaccccatcagtaaccaccatcgcaaaagcaacaaaaacaataccttac
gaaatattaacaagtatttcaagcagggtaaaacgggttttttacagagaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system