KEGG   Flavobacterium psychrophilum CSF259-93: FPSM_02549
Entry
FPSM_02549        CDS       T03254                                 
Name
(GenBank) Cell elongation specific D,D-transpeptidase
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
fpc  Flavobacterium psychrophilum CSF259-93
Pathway
fpc00550  Peptidoglycan biosynthesis
fpc01100  Metabolic pathways
fpc01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:fpc00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FPSM_02549
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    FPSM_02549
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:fpc01011]
    FPSM_02549
Enzymes [BR:fpc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     FPSM_02549
Peptidoglycan biosynthesis and degradation proteins [BR:fpc01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   FPSM_02549
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: AIJ39044
UniProt: A0A076NWY2
Position
2813031..2814971
AA seq 646 aa
MRKLLLPGIVIIAGILITARLFYLQIIDDTFKLKSENISIKIKYDYPERGYIYDRNGALM
VANQPSYDIMVIPRETKSMDTIEFCNLLNITKTDFIKKIQKAVVYSPMLPSVFLGQLNKL
EYAAFQEKERKFEGFYIQKRSLREYQLTAGANVFGFITQANEAMVKQNPYYKSGDLLGKQ
GVEETYEAELRGTKGVKHIQRDRFNREIGPYKEGKYDTIAKQGKDITLTIDAELQKYGEA
LMKNKRGGIIAIEPSTGEILCLVTAPSYDPAILVGRQRSRNYTKLYNDSLAKPLYDRSLL
AEYPPGSPFKILTALAGLQAKVIDTSSSFICNRGFSYGRGRFMGCHCGGGVRKLHMGIAK
SCNTYFANTYLRTIAKFPTPTAGVDFWSHNIKSFGLGQFMGYDLPTGRKGKIPTSETYKK
MYPNGGWRGTAVISNSIGQGEVLMTPIQLANMMATVANQGYYYTPHIIKKIKGQQIDPKF
RTKHVTSIDKKYFKPVINGLAEVFKTGTAYFLKVDGIEICGKTGTADNFARVNGKKVMLK
PHSVFVAFAPKVNPTIAIAVLVENGGFGSTVAGPITTLMLEKYIKKEITMKDREKRVLET
SLQGEYNRFTRKYLDSMYKIKIRKDSILRTINTKKLDSIKKSKPTT
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgagaaagctattacttccagggatagttataattgctggcattcttatcacagcaaga
ctcttttatttgcaaattattgatgacacatttaaactaaaatccgaaaatatttcgatc
aagattaaatatgactatcccgaaagaggttatatttatgatagaaacggagcactcatg
gttgccaaccaaccatcgtatgacatcatggtaatacctcgtgaaaccaaaagcatggac
acgattgagttttgcaatcttctaaatattaccaagaccgattttataaaaaaaatacaa
aaagcagtcgtttacagccccatgctaccctcagtatttttaggacagctaaacaaatta
gaatatgctgctttccaagaaaaagaaagaaaatttgaagggttttatatacagaaacgt
tccctcagagaatatcaactaaccgcaggagccaatgtttttgggtttattacccaagca
aatgaagcgatggtaaaacaaaatccctattacaaaagtggcgatttgctaggaaaacaa
ggggtagaagaaacctatgaagcagagcttcgaggtacaaaaggcgtaaaacacatacaa
agagaccgtttcaatagagaaataggcccttacaaagaaggaaaatacgacaccattgca
aaacaaggaaaagacatcacgctaactattgatgcggaacttcaaaaatacggagaagca
ctaatgaaaaacaaacgaggcggtattatcgccatcgaacctagtacgggagaaatcctt
tgtttagttactgctccgtcctatgaccctgccattttagtaggcagacaacgctcacga
aactacacgaaactttataatgattcattagcaaaaccactatacgatagaagcttacta
gcagaataccctcctggttcccccttcaaaatattaacagcattagcaggcttacaagca
aaggtaatagacacatcgagtagctttatatgcaaccgtggctttagctatggccgagga
agatttatgggttgccactgtggtggtggtgttcgcaaactacacatgggaatagcaaaa
tcttgtaatacctattttgcaaatacttatttgagaaccatcgcaaaatttccaacacca
acagcaggcgtagatttttggagccataacataaagagttttggcttggggcagtttatg
ggctatgatttacccacaggccgaaaaggaaaaattccaacatctgaaacctataaaaaa
atgtaccccaatggtggttggagaggaactgcagtaatatcaaattcgataggacaagga
gaagtcctaatgacgccaatacaattggcaaatatgatggcaacagttgcaaaccaaggt
tattattacacacctcatatcatcaaaaaaattaaaggacaacaaatagatccaaagttt
agaacaaaacacgtaacgagtatcgacaaaaaatatttcaaaccagttattaatggtttg
gcagaagtatttaaaacaggaactgcctattttctaaaagtagacggaatagaaatttgc
ggaaaaacaggaaccgccgacaattttgcccgagtaaacggaaagaaagtaatgctaaaa
ccacactcagtattcgtagcatttgcacccaaagtaaaccctacaatagccattgcagtt
ttagtcgaaaacgggggttttggttcgactgtggctggccccattactactttaatgtta
gaaaaatacattaaaaaagaaatcaccatgaaagacagagaaaagcgcgttttagaaacc
agtcttcaaggagaatataacagatttacacgaaaatacctagactctatgtacaaaatt
aagattagaaaagactctatcttacgaacaataaacacaaaaaaactagattctattaag
aaaagcaaacctacaacgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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