KEGG   Fusobacterium periodonticum: C4N17_11080
Entry
C4N17_11080       CDS       T06291                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpei  Fusobacterium periodonticum
Pathway
fpei03410  Base excision repair
fpei03430  Mismatch repair
fpei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C4N17_11080 (recJ)
   03430 Mismatch repair
    C4N17_11080 (recJ)
   03440 Homologous recombination
    C4N17_11080 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpei03400]
    C4N17_11080 (recJ)
DNA repair and recombination proteins [BR:fpei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     C4N17_11080 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     C4N17_11080 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C4N17_11080 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Acetyltransf_4 Hom_end
Other DBs
NCBI-ProteinID: AVQ26126
Position
2204993..2206657
AA seq 554 aa
MLDEKSTEELIKDLLEKRGQESQHQIEKFMNPEYKDFKNPFDFENMEKIVNRIILARENK
EKIFIYGDYDVDGISGTAFLTRFFNEIGIDTNYYIPSRNETDYGVSKKSIDYFHKRQGKL
VITVDTGYNTIEDVRYAKSLGMEVIVTDHHKTVKEKFDDEILYLNPKLSKSYKFQYLSGA
GVAFKLAQGLCMSLGLDMGIIYKYLDIVMIGTIADVVPMIDENRLIIKKGLKIIKNTKVK
GLSYLLNYLRLNKKTLTTTDVSYYISPLINSLGRVGISRMGADFFLKEDEFDLYNIIEEM
KEQNRQRRTLEKYIYDDAMRKIKNLKLPLDKLSVIFLSSSKWHPGVIGVVSSRLTIKFNV
PVILVAIDGDYGKASCRSVGNISIFNLLSNVKHLLERYGGHDLAAGFVVHKEKLNELREY
FIRTIPRLKEEDNKAKKDYEKSFDFELSVKDLGEKAFDFMEKMGPFGSSNPHPLFFDSNL
KLDNIKRFGVDFRHFNGIIYKDNVSYNAVGFELADEIKEDYINKTYNIVYYPEKIILNNE
EVTQIILKSIKENK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgctagatgagaaaagtacagaagagttaatcaaggatctcttagagaagagagggcaa
gaaagtcaacatcaaatagagaaatttatgaatcctgagtacaaggacttcaaaaatcct
tttgattttgaaaatatggaaaaaatagtaaacagaataatcttagcaagagaaaataaa
gaaaaaatatttatctatggagattatgatgtagatggtataagtggaacagctttttta
actagattttttaatgagataggcatagatacaaactattatattcctagtagaaatgaa
acagactatggagtatctaaaaaaagtatagactacttccataaaagacaaggaaagtta
gttataacagtggatacagggtacaatacaatagaagatgtaagatatgctaaaagtcta
ggtatggaagtgatagtcacagaccatcataaaacagtgaaagaaaagtttgacgatgag
atattgtatttaaatccaaaattgagtaaaagctataaatttcaatatctttctggggcg
ggagtagcatttaaattggcacaagggctgtgtatgagtttaggcttagacatgggaatt
atctataaatatttggatatagttatgataggaactatagcagatgttgtgcctatgata
gatgaaaatagactgattataaaaaaaggtctaaagattataaagaatactaaggtgaaa
ggactttcttatttacttaattacttaagattaaataaaaagactttaactacaacagat
gttagttattatatttcacctttgataaattctttaggaagagttggaatctcaagaatg
ggagcagacttctttttaaaggaagatgaatttgatctttataatataatcgaagagatg
aaggaacaaaacaggcaaagaagaacattagaaaaatatatctatgatgatgcaatgaga
aagattaagaacttaaagttaccacttgataaactttcagttatctttctttcatcatct
aaatggcaccctggagttattggggtagtatcatcaagattgactataaagttcaatgta
ccagttatattggttgccatagatggagattatggaaaggcttcttgtagaagtgttgga
aatataagtatattcaatcttttatcgaatgtaaaacatcttctagaaagatatggtgga
catgatttagcagcaggttttgttgtacacaaagaaaaattaaatgagcttagagaatat
ttcataagaactatacctaggttaaaagaagaagacaataaggctaaaaaagattatgaa
aagagtttcgattttgaattatctgtgaaagacttaggagaaaaagcttttgattttatg
gaaaaaatgggaccttttggttctagcaatccacatcctttattcttcgatagtaattta
aaactagataatataaaaagatttggggtagactttagacattttaatggtattatatac
aaggacaatgtaagctataatgctgttggctttgaattagccgatgaaattaaagaagac
tatattaataagacatacaatatagtatactatcctgagaaaatcattttaaacaatgag
gaagttacacaaattatattgaaaagtattaaagaaaataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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