KEGG   Francisella persica: ACH24_00670
Entry
ACH24_00670       CDS       T04357                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
fper  Francisella persica
Pathway
fper03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACH24_00670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fper03019]
    ACH24_00670
   03016 Transfer RNA biogenesis [BR:fper03016]
    ACH24_00670
Enzymes [BR:fper01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     ACH24_00670
Messenger RNA biogenesis [BR:fper03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACH24_00670
Transfer RNA biogenesis [BR:fper03016]
 Prokaryotic type
  tRNA degradation factors
   ACH24_00670
SSDB
Motif
Pfam: RNB S1 OB_RNB RNase_II_C_S1 CSD2
Other DBs
NCBI-ProteinID: ALB01337
UniProt: A0A0K2JQH0
Position
154001..156277
AA seq 758 aa
MSKYSIHNDPNRDIEARKYENPIPSREVILNYIRDVKFPVSIENIANTLEIFKNNLFEGL
VNRLSAMVRDGQLEKYKAYYNLPEMAAIYITSKVTSDKDSHLELFSHTLNTKVAIVSHQA
KMVMVGDEVTAKVLGLNKRGRIEAEIKTIVSRAQKTITGYYYKSFDCHFLKPISKNITND
IVLLPPKQKIEHNSLIEAEIIVYPSINSAAVARFKQEVEAVSPVKEAMIMATQKYDLVEQ
WSKKSLRYLDDISEQITVGTRIDLRDKHFVTIDGEDAKDFDDAVYAHKTKRGSWKLYVAI
ADVSNYVEKDSALDLDAKRRSTSVYFPGYVIPMLPEKLSNCLCSLRPNEDRYSLVCEMNI
SKEGKLSRYKFYSAVINSKARLTYTEVDKLLEKKQNLIVEQNPELIENIFDLYELYKILH
QARVERGAIDFDTVETQIILDEHNHIESIVPKHRNDAHRLIEECMLVANVAAAKFAIKYK
KTSPFRVHSEPKQDRMETLKKYLAKHGIHLAYGKNGKVTPKALALMLDSVKYRPDYDDIQ
MMTLRSMNQAIYSINNDGHFGLAYSEYTHFTSPIRRYPDLVVHRIIKSIIGEYEHGAADY
KPYELANICENASDQERNADAASKQVENWLKCYFMHDYIGHVLEAQIKHINGLGLFAELK
DMYIEGLIHVSAIPGDYYIYDETKDILIGKRTHKVYNIGQDITVRVVRADLENIHIDFEL
FDPKKTFGDNNLDKPFANKKPKKTKKVKKKKARRRRKK
NT seq 2277 nt   +upstreamnt  +downstreamnt
gtgagtaaatatagcatacataatgatccgaatagggatattgaggcacgaaaatatgaa
aatccaatcccaagtagagaggtgattttaaattatataagagatgtaaaatttcctgtc
agtattgagaatatagcaaatactctagagattttcaaaaataatctttttgaaggtctt
gtaaatcgtttaagtgcaatggttagagatggtcagttagagaaatataaggcatattat
aacttaccagaaatggcagcgatttatataacttctaaagttacatctgataaagattct
caccttgagttatttagtcatactttgaatactaaagttgctattgtctctcatcaagca
aaaatggtaatggttggcgatgaggtcacagcaaaagttttaggtcttaataaacgtgga
cgaatagaagcagaaataaaaacaatcgtttcacgagcacaaaagactataacaggttac
tattataaaagctttgattgtcatttcttaaaacctataagtaagaacataacaaatgac
attgttctgttaccaccgaaacaaaaaatagagcataattctctgatagaggctgaaata
atagtttatcctagtataaatagtgctgcagtagctagatttaaacaagaggtagaagct
gtatctccagttaaagaagcgatgattatggcaactcaaaaatatgatctagtagagcag
tggagcaaaaaatcgttgagatatctagatgacatctcagaacaaataactgtaggtact
agaatagatttacgcgataaacactttgtaactatagatggtgaagatgctaaagatttc
gatgatgcagtctatgcacacaaaactaagagaggtagttggaagctatatgtagcaatt
gcagatgtttcaaattatgttgagaaagattcagctttggatttagatgctaaacgtcgt
tcaacatcagtatatttccctggttatgtaataccgatgttaccagaaaaactatcaaat
tgtttatgttcattaagaccaaacgaagatagatattctctagtgtgtgagatgaatatt
agtaaggaaggtaagctttctaggtataagttttattcagcagtaataaattcaaaagcg
cgtttgacatatacagaggtagataagcttttagaaaagaagcaaaatcttattgttgag
caaaatccagagcttatagaaaatatttttgatttatatgagttgtataaaatacttcat
caagctagagttgaaagaggtgctatagattttgatacagttgaaacacagataatcctt
gacgagcataatcatatcgaatcaattgtgccaaagcatcgtaatgatgctcatcgatta
atagaagaatgtatgcttgtagctaatgttgcggcagctaaatttgcaataaaatataag
aagacgtcgccatttagagttcatagtgaacctaaacaggatagaatggagactcttaag
aagtatctagctaaacatggtatacatcttgcttatggtaaaaatggtaaagtcactcca
aaagcattagcactgatgctggacagcgtaaaatatcgtcctgattatgatgatattcag
atgatgactttgcggagtatgaatcaggctatttacagtataaataatgatggtcatttt
ggtttggcatatagtgaatatacacatttcacatcaccaattcgtagatatccagattta
gtagtacataggataattaaatcaattattggtgaatatgagcatggtgctgctgattat
aaaccttatgaactagctaatatttgtgagaatgcttcagatcaagagcgtaacgctgat
gcggcatctaagcaagttgagaattggcttaagtgctactttatgcatgattatattggt
catgtccttgaggcacaaatcaagcatataaatggcttaggtctttttgcagagctaaaa
gatatgtatatagaaggtttgatacatgtatcagcaattcctggtgattattatatttat
gatgaaactaaggatatattgataggcaagagaacacataaagtctataatattggtcaa
gatataacagtaagagttgtacgtgcggatctagagaatattcatatagatttcgaatta
tttgatccaaaaaaaacatttggtgacaataatttagataagccatttgctaataaaaag
cctaaaaagactaagaaagttaaaaagaaaaaagcaagacgtagaagaaaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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