KEGG   Flavonifractor plautii: A4U99_06275
Entry
A4U99_06275       CDS       T04429                                 
Name
(GenBank) DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
fpla  Flavonifractor plautii
Pathway
fpla03420  Nucleotide excision repair
fpla03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fpla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A4U99_06275
   03430 Mismatch repair
    A4U99_06275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpla03400]
    A4U99_06275
Enzymes [BR:fpla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A4U99_06275
DNA repair and recombination proteins [BR:fpla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4U99_06275
   MMR (mismatch excision repair)
    Other MMR factors
     A4U99_06275
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor
Other DBs
NCBI-ProteinID: ANU40691
UniProt: A0A1C7FLJ1
Position
1295399..1297522
AA seq 707 aa
MTYPEFKARYALTPDPQQEAAILRAEGPTLLLAVPGSGKTTTLVTRLGYLIHCLGVEPGR
ILTVTYTVAAAGDMKRRFAALFGEAHAGALAFRTINGICQSIISYYAWAKGAEPFALWTN
EGELNALVRWLMQSHGAEWPGEQEVKEVRTRITCCKNGMLRDEEVRAIEMDGVDFPAVYF
GYREYLERNRRMDYDDQMVFALRILRRYPDILAHFQSKYPYLCVDEAQDTSKIQHAILRL
LAARSRNLFMVGDEDQSIYGFRAAWPQALMEFRQIYPEGEVLLMETNYRSAGAIVEKADA
FIQRNGSRHPKHMRASRPQGEPVRHVNLNDFGQQAHYLAQAAADCTESTAVLYRNNDSAL
PLIDLLERRGIPYACRQRESFFFTSPAVRDLTDVLRFALDGTDRERFLRIYYKLEVRVKR
SVLQEKLRRVPEGAPVLDALIDGGGVEPWQTGRLKALRTHLSKLPQLSSFAALQRIVKYM
GYGDYLSGQGGDKSRVELLLALARQEPGVEGFLRHLDALRDTVETGSGDLACPFVLSTIH
ASKGLEYDRVFLIDAVDGIFPSVNPRKGNDLSDEERRALEEERRLFYVGATRARRQLVLL
TCDNRFGEPSPPASFVGQFLGTPEWASQRPRTPGKAPAEPDAATVAAWEKDYLPGTAVVH
RAFGPGMVVSRSGAVAVIAFDQVGTKKVELTACLRKRLLRLASAPGF
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgacctaccccgaattcaaagccagatacgccctcacccccgatccccagcaggaggcg
gccatcctccgggccgaggggcccaccctgctgctggcggtgccgggcagcggcaagacc
accaccctggtgacccggctgggctatctcatccactgcctgggggtggagccggggcgc
atcctcaccgtcacctacactgtagccgccgccggggacatgaagcggcgctttgccgcc
ctctttggggaggcgcacgccggcgcgctggccttccgcaccatcaacggcatctgccag
tccatcatctcctactacgcctgggccaagggggcggagcctttcgctttgtggaccaac
gagggggagctgaacgccctggtgcgctggctgatgcagtcccacggggccgagtggccg
ggggagcaggaggtgaaggaggtgcgcacccgcatcacctgctgcaagaacgggatgctg
cgggacgaggaggtgcgggccattgagatggacggggtggattttcccgccgtctacttc
ggctaccgggagtacctggagcgcaaccgccgcatggactacgacgatcagatggtcttt
gccctgcggattctccgccgatatcccgacatcctggcccacttccagagcaaatacccc
tacctctgcgtggacgaggcccaggacacttccaaaatccagcacgccatcctccgcctg
ctggccgcccggagccgcaacctgttcatggtgggggacgaggatcagagcatctacggc
ttccgggccgcctggccccaggcgctgatggagttccggcagatctacccggagggggag
gtgctgctgatggagaccaactaccgctccgccggggccatcgtggagaaggcggacgcc
ttcatccagcgcaacggcagccgccaccccaagcacatgcgggccagccgcccccagggg
gagccggtgcgccacgtgaatctcaacgacttcgggcagcaggcccactatctggcccag
gcggcggcggactgcacggagtccaccgccgtgctctaccgcaacaacgacagcgccctg
cccctcatcgacctgctggagcgccggggcatcccctacgcctgccgccagcgggagagc
ttcttcttcaccagcccggcggtgcgggatctcaccgatgtgctccgctttgccctggac
ggcacggatcgggagcggtttctgcggatttactacaagctggaggtgcgcgtcaagcgg
agcgtcctccaggagaagctgcgccgggtgccggagggcgcgccggtgctggacgccctc
atcgacgggggcggcgtcgagccctggcagacggggcggctcaaggccctgcgcacccac
ctgtccaagctgccccagctctccagctttgccgccctccagcgcatcgtcaaatacatg
ggctacggggactacctgtccggccaggggggcgacaagagccgggtggagctgctgctg
gccctggcccggcaggagccgggggtggagggctttctccgccacctggacgccctgcgg
gacacggtggagacggggagcggcgacctggcctgcccctttgtgctctccaccatccac
gccagcaagggcctggagtacgaccgggtgttcctcatcgacgcggtggacggcattttc
ccatcggtgaatccccggaaggggaacgacctgtccgacgaggagcggagggccctggag
gaggagcggcggctcttctacgtgggggccacccgggcccggcggcagcttgttctgctc
acctgtgacaaccgctttggcgagccgtcacccccggcctccttcgtggggcagttcctg
ggcacgccggagtgggcgtcccagaggcccaggactccgggcaaggccccggcggagcct
gacgccgccacggtggcggcgtgggagaaggactacctgcccggcacggcggtggtgcac
cgggccttcgggcccggcatggtggtgagccgctccggcgcggtggcggtgatcgccttc
gaccaagttggcaccaaaaaggtggagctgaccgcctgtctgcggaagcggctgctccgg
ctggcctccgccccgggcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (86)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (102)   

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