KEGG   Flavobacterium psychrophilum FPG3: FPG3_04400
Entry
FPG3_04400        CDS       T03296                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fpo  Flavobacterium psychrophilum FPG3
Pathway
fpo02024  Quorum sensing
fpo03060  Protein export
fpo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fpo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FPG3_04400
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FPG3_04400
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FPG3_04400
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fpo02044]
    FPG3_04400
Enzymes [BR:fpo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FPG3_04400
Secretion system [BR:fpo02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FPG3_04400
  Eukaryotic Sec-SRP protein
   FPG3_04400
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 cobW CbiA AAA_33 AAA_31 AAA_24 CLP1_P AAA_17 APS_kinase 6PF2K ATP_bind_1 DUF5693 TsaE KAP_NTPase NACHT DO-GTPase1 AAA_18 KTI12 AAA_16 CdiA_C ArsA_ATPase MMR_HSR1
Other DBs
NCBI-ProteinID: AIN73678
Position
980481..981830
AA seq 449 aa
MFNSLSEKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTAKVKEKAI
GADVLTTLQPGQLLVKIVKDELTELMGGDVAGINLSGTPTVILMSGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVACDIYRPAAINQLHVVGGQIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDEEMMAEISRVHKAIQPQETLFVVDAMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMDAIDVFYPERMAERILGMGDVV
SLVERAQEQYDEEEARKIQRKIAKNEFGFDDFLSQIQQVKKMGNMKDLVGMIPGAGKALK
DVEIQDDAFKHIEAIIYSMTPTERSKPAIIDVKRKARIAKGAGRKLEEVNQLMKQFDQMS
KMMKIMQGPGGKNMMKMMGGMKGGMPGMK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgttcaatagtttaagcgaaaagttagataaagccttccatatattaaaaggtcacgga
aaaatcaccgaagtaaacgttgccgatacactaaaagaagtgcgtcgtgccttactagat
gccgatgttaacttcaaaatagccaaagattttactgccaaagtaaaagaaaaagcaata
ggagcagacgttctaacaaccttacagccaggacaattattagttaaaattgtaaaagac
gaattaaccgagttaatggggggcgatgtagcaggaattaacctttctggaacaccaaca
gtaattttaatgtcaggattgcaaggttctggaaaaactactttttcaggaaagttggct
aattttttaaaaactaaaaagaacaaaaaaccattattggttgcctgcgatatttatcgc
cctgctgcaataaatcaattacatgtagttggaggacaaataggtgtcgaggtttactct
gaaccagaaaataaaaatccagtagaaattgctcaaaatgcaataaagcacgctaaagcc
aatggttttaatgtcgttatagtagatacagcgggtcgtttagctgtcgatgaagaaatg
atggcagaaatttctcgtgttcataaagcaattcaaccacaagaaaccttgtttgttgta
gatgcaatgacaggacaagatgccgtaaatacagcaaaagctttcaatgatattttaaat
ttcgatggtgtaattcttactaaattagatggagatacccgtggtggagcagcaatttct
attaaatcagtagtaaacaaacctattaaatttgtaggaactggcgaaaaaatggatgcg
attgatgttttctatccagagcgtatggcagagcgtattcttggtatgggcgatgttgtg
tcgcttgtagaaagagcgcaagagcaatacgatgaagaagaggctagaaaaattcaacga
aaaattgctaagaacgaatttggtttcgatgattttttatctcaaattcagcaagtaaaa
aaaatgggaaatatgaaagatcttgtaggcatgattcctggagcaggaaaagcactaaaa
gatgtagagattcaagacgatgctttcaaacatattgaagccataatatattcgatgaca
ccaaccgagagaagcaaaccagcaataatcgacgtgaagcgaaaagcaagaattgcaaaa
ggtgcaggaagaaaactagaagaagttaatcagctcatgaaacagtttgatcaaatgagt
aaaatgatgaaaataatgcaaggtccaggtgggaaaaatatgatgaaaatgatgggcgga
atgaaaggcggaatgccaggaatgaaataa

DBGET integrated database retrieval system