KEGG   Flavobacterium psychrophilum FPG3: FPG3_10460
Entry
FPG3_10460        CDS       T03296                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fpo  Flavobacterium psychrophilum FPG3
Pathway
fpo03030  DNA replication
fpo03430  Mismatch repair
fpo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FPG3_10460
   03430 Mismatch repair
    FPG3_10460
   03440 Homologous recombination
    FPG3_10460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpo03032]
    FPG3_10460
   03400 DNA repair and recombination proteins [BR:fpo03400]
    FPG3_10460
Enzymes [BR:fpo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FPG3_10460
DNA replication proteins [BR:fpo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FPG3_10460
DNA repair and recombination proteins [BR:fpo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FPG3_10460
SSDB
Motif
Pfam: RNase_T RNase_H_2 DEDDh_C
Other DBs
NCBI-ProteinID: AIN74675
Position
complement(2272761..2273327)
AA seq 188 aa
MLDWLKKIGKDYPEFWKNYLVQFEMQTERKVALYIETTGINPAKDKIISIGAIAIEKNQI
RIDNCLEIELNKAEILEGKDFSYQEIQAIESLINFIGNATLVGHRIHYDIQIINEYLHKL
QSGRIKNNLLDVEVMHGRIIDQNAKQFSLTELLSIYKIDSPHIPTSANMAFSIALLFLKL
KSRLKMTN
NT seq 567 nt   +upstreamnt  +downstreamnt
atgctcgattggttaaaaaaaataggcaaagattacccagaattttggaaaaattacctt
gttcagtttgaaatgcaaaccgaaagaaaagttgcattatatatagaaacaacgggaata
aatccagctaaagataaaattatatctattggtgccattgccatcgaaaaaaatcagatt
cgtatagacaattgtttagaaatagaactaaataaagccgagatattagaaggtaaagac
tttagttaccaagagattcaggctatagaatccttaataaattttataggaaatgcaact
ctggtagggcatcgcattcattatgacattcaaattattaatgagtatttgcataaattg
cagagtggtcgcattaaaaataacttgctagatgttgaagtgatgcatggcaggattatt
gaccaaaatgctaaacaattttcattaaccgaattgttatcaatttataaaattgattct
ccacatattcctacatcggcaaacatggcattttcaatagctttgctgtttttgaaatta
aaaagcagattaaaaatgactaattaa

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