KEGG   Frischella perrara: FPB0191_02248
Entry
FPB0191_02248     CDS       T03525                                 
Name
(GenBank) replication restart DNA helicase PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
fpp  Frischella perrara
Pathway
fpp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FPB0191_02248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpp03400]
    FPB0191_02248
Enzymes [BR:fpp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FPB0191_02248
DNA repair and recombination proteins [BR:fpp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FPB0191_02248
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR PriA-like_WH AAA_30 AAA_19 zf-IS66 T2SSE zinc-ribbons_6 FtrD-like AAA_11 PIF1
Other DBs
NCBI-ProteinID: AJA46052
UniProt: A0A0A7S5C8
Position
2580258..2582447
AA seq 729 aa
MLIAKVVLPIRLHQIFDYIVPDNLCTIVGAGQRIKVPFGNRQAIGIITALSKDSEFELDK
LKTIHSIIDNQTLFSAKIWQLLNWAANYYHYPLGEVLFHALPILLRQGKLAALQETQIWQ
LTEKGRHFDTQLLSRSIKQQALLNLLQADQPVDNQDFSPAIFKGLQDKQLIEKVAISSIT
NDWRIDFQPQHMPFQLNQQQHTAINEIVRQLDKFTAFLLEGVTGSGKTEVYLQAIQSVLA
QGRQALVLVPEIGLTPQTIKRFQQRFNVPIVVLHSAMSDKARLAAWLQCRTGDIAIVIGT
RSALFTPFSNLGMIIVDEEHDSSFKQQEGWRYHARDLAILRAKIEQIPIVLGSATPSLET
LNNAYNQRYRHLLLTERAGNAQLAKQTILDIKGLVLTAGLSQPLTAKIKQHLANNNQVML
FLNRRGFSPLLICHDCGWIAECPRCDRPFTYHQKQHKLICHHCDTPRTIPTQCPKCGSTH
LVPIGFGTEQLEQQLNILFPTIPVTRIDRDSTQKKGSLDQYLQAIGKGGKHILVGTQILA
KGHHFPDVTLVGIVDVDGALFSSDFRATERFAQIYMQVSGRAGRENKTGEVILQTYHPEH
PLLNNLLHNGYSAFAKQTLAERKSTLLPPFSYQALIHAADRNNQYAPQLLQKIVDWLHTY
HTDPSLWLLGPSPANQPKKAGYYRWQLLLQHGQRAKLQAILSELVIMIEKWSEAKNSRWS
IDVDPIDGW
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgttaattgccaaagttgttttacccattagattacatcaaattttcgattatatcgta
cccgataatttgtgtactattgtcggtgccgggcaacgaattaaagtcccttttggtaat
cgacaagctatcggaattattaccgcattaagtaaggatagtgaatttgaattagataaa
ctaaaaactatccatagtataatagataatcaaactcttttttctgcaaaaatatggcaa
cttttaaattgggctgccaattattatcattacccactgggggaagttttatttcacgca
ttacctatcttattacgtcaaggtaaacttgctgcgcttcaagaaacacaaatttggcaa
ctgacggaaaaaggtagacatttcgatacacaattgttgtctcgctcaattaaacaacaa
gcgctattaaatttattgcaggctgatcaacccgttgataatcaagacttttctcctgct
atatttaaaggtctacaagataaacaattaattgaaaaggtggcgatttcatctattacc
aatgactggcgaattgactttcaaccgcaacatatgcctttccaacttaatcaacaacaa
catacggcgattaatgaaatagtacgacaattagataaatttactgcctttttattagaa
ggcgtaaccggatcagggaaaacagaagtctatctacaagccattcaatctgtgcttgcg
caaggtcggcaggccttagtattagtacctgaaataggactgacaccacaaacgattaaa
cgatttcaacaacgtttcaatgtaccaatcgttgttttgcattcagcgatgagtgataaa
gcgcgtttggcagcttggttgcaatgtcgtactggcgacattgctattgtaattggaacg
cgctcggcattatttacgccattttctaatcttggcatgattattgttgatgaagagcat
gatagttcttttaaacagcaagaaggttggcgataccatgcgcgtgatctcgctatattg
cgagccaagattgaacaaatacctatcgtgttaggctctgctacgccttcattagaaact
ctaaataatgcatataatcaacgttatcgtcatttattgcttaccgaaagagcgggaaat
gcgcaattagctaaacagacaatcttagatataaaagggttagtactaacagccgggtta
tctcaacctcttactgctaaaattaagcaacatttggctaacaataatcaggtcatgcta
tttttaaatcgtcgtggtttttcaccattattaatttgtcatgattgtggttggatcgct
gaatgcccgcggtgtgatagaccttttacttatcaccaaaagcagcataaattaatttgt
caccattgcgatactccaagaacgataccaactcaatgccctaaatgtgggtctacacat
ttagtcccaatcggatttggtacagaacagttagagcaacaactcaatatcttatttccg
accattcctgtaactcgaattgatcgtgattcaacccaaaagaaagggagtttagatcaa
tatttacaagcaattggtaaaggaggtaaacatattttagttggtactcaaattctagct
aagggtcatcattttccagatgtaacacttgtaggtattgtggatgtggatggtgcatta
ttttctagcgattttcgggcaaccgaacgttttgctcaaatatatatgcaagtttcgggt
cgggctgggcgtgagaataaaacaggtgaagtgattctgcaaacctatcatcctgaacac
cctttattgaataatctattgcataacggctattcggcttttgcaaagcaaacattggca
gaaagaaaaagtacattattaccaccctttagttatcaagccttaatccatgctgctgat
cgtaataatcaatacgccccacaattattgcagaaaatagttgattggttacatacttac
catactgatccttctttatggttattaggaccaagtccagcaaatcaacctaaaaaagcg
ggctattatcgatggcagttattactacaacatggtcaacgcgctaaactgcaagctatt
ttgagcgagttagtcataatgattgaaaaatggtcggaagcaaaaaatagccgttggagt
attgatgtcgaccctattgatggttggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (72)   

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