KEGG   Faecalibacterium prausnitzii L2-6: FP2_10670
Entry
FP2_10670         CDS       T02591                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
fpr  Faecalibacterium prausnitzii L2-6
Pathway
fpr02020  Two-component system
fpr02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:fpr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FP2_10670
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FP2_10670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fpr03021]
    FP2_10670
Transcription machinery [BR:fpr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FP2_10670
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_Crp_2 HTH_24 HTH_32 HTH_36 MarR
Other DBs
NCBI-ProteinID: CBK98616
UniProt: D4K523
Position
complement(1047321..1048616)
AA seq 431 aa
MEGPQFRQELSQQLKLCPQLMQNIALLQMNVQDLREFLERAVEENPMLEQQEPSGDAFRE
LSARNEWMRTSSDAPPEPGAEDRELTSRESFLREQLERRKLPPKLLSLCTYLIERLDEDG
FLPPEELEHLHHLGLPAPMLEEALAAVQALEPAGIAARSLSECLLIQLRRSGQETPLLTE
LVSHHLEPLARQQYSPLAHLLHCSKAEVENAAAQIAQLDPHPGRWDAPASEPVQYIQPDA
YVLDENGALSVVLNDFYLPHLTLSSQYEEMMHSADAETASYLRRACKQAQELLSGLSRRG
KTLHRCLEAVVSTQAPFFLLPDGVLSPMTRRTLAESLGLNPSTITRALKGKYLQCRRGIY
PLSAFFSQPVGGSSPQEIRTRMVQLLQQEPMLNDRLLRERLAQEGYQLAQRTVSKYRRRL
ALPAASKRPKK
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggaagggcctcaattccgtcaggagctgtcccagcagctcaaactctgcccccagctg
atgcagaatatcgccctgctccagatgaacgtacaggatctgcgcgagtttctggaacgt
gccgtggaagaaaacccgatgcttgaacagcaggagccgtccggcgatgccttccgggag
ctgtcggcccggaacgaatggatgcggacttcttccgatgctccgcctgagccgggtgcg
gaagaccgggagctgaccagccgggaaagctttctgcgggagcagctggaacgcagaaag
cttccgccgaagctcttgtccctctgcacctatctcatagagcgtttggatgaggacggc
tttctgcccccagaagagctggagcatctgcatcatttggggcttccggctcccatgctc
gaggaggcactggcggcagttcaggccttggagccagccggtatcgcggcccggagtttg
tccgagtgcctcctgatccagcttcggcgcagcgggcaggaaacgcctctgctcaccgag
cttgtctcccatcatcttgagcccctcgcccggcagcagtacagcccgctggcacatctg
cttcattgctccaaggcagaagtggaaaatgcggcagctcagatcgcacagctggaccca
caccccggacgatgggatgctccggcttctgagccggtgcagtatatccagccggatgct
tatgtgctggatgaaaacggagcgctttccgtagtgctcaacgatttctatcttccgcac
cttacgctcagcagccagtatgaagagatgatgcattctgccgatgcggaaacagcctcc
tatctgcgccgcgcctgcaagcaggcacaggagcttctcagcggactttcccggcggggg
aaaacgctccaccgatgtctggaggctgtagtgagcacgcaggcccccttttttcttctg
ccggatggagtgctttcccctatgacccgccgcactctggcagagtctcttgggctgaat
ccgtccaccatcacccgggcgctgaagggaaaatatcttcagtgccgccggggaatttac
ccgctcagcgcatttttttctcagcccgtcggcggcagttctccgcaggagatccgcacc
cgaatggtgcagctcctgcagcaggagccgatgctcaacgaccgtctcctccgggagcgt
ctggcgcaggagggctatcagctcgcgcagcgcaccgtgtccaaataccgtcggcggctt
gcgcttccggctgccagcaagcgcccaaagaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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