KEGG   Faecalibacterium prausnitzii L2-6: FP2_15460
Entry
FP2_15460         CDS       T02591                                 
Name
(GenBank) Superfamily II DNA and RNA helicases
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
fpr  Faecalibacterium prausnitzii L2-6
Pathway
fpr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fpr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FP2_15460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpr03019]
    FP2_15460
   03009 Ribosome biogenesis [BR:fpr03009]
    FP2_15460
Enzymes [BR:fpr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     FP2_15460
Messenger RNA biogenesis [BR:fpr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     FP2_15460
Ribosome biogenesis [BR:fpr03009]
 Prokaryotic type
  rRNA helicases
   FP2_15460
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_30 UTP25 AAA_19 Helicase_RecD
Other DBs
NCBI-ProteinID: CBK99026
UniProt: D4JYC7
Position
1518457..1519644
AA seq 395 aa
MLYSELQCSEAIHKAVERMGFAEMTEVQEKTIPVMLAGRDVIAKAPTGTGKTCAFGIPVA
EHIDPALKAPQAVILAPTRELAQQIAEELTGLTYFMPEVQVVCVYGGANMEKQAKRLAEG
CQIVVATPGRLMDHYKHHNIDLDHVTQVVLDEADEMLNMGFYKDVKHIIGLMKARKSLSM
FSATISREVMDIGWMYQKDAEEITVQPKEESQPKITQYMLETSGRNKLSDLAQIIIGEGY
KRVMVFCDTKFNTAALANQLARLGFSVDCLHGDLSQNERNRIMQNFRDGKLNVLVATDVA
ARGIDVSDVDAVINYDVPGDNEHYTHRIGRTGRAKKEGVSYLFYVPEEKKRVQELLRLTR
NTDLCTPVHFDFNHEHIVVEKKQDSADRFQIKCYF
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgctttacagcgaattacagtgcagcgaggccatccataaggccgtagagcggatgggc
tttgcggaaatgaccgaggtgcaggaaaagaccatccccgtcatgctggccgggcgtgac
gtcatcgccaaggcccctaccggcactggcaagacctgcgctttcggcatcccggtggcc
gagcacatcgacccggctctcaaggccccgcaggccgttattctggcccccacccgtgag
ctggcccagcagatcgctgaagaactcacagggctgacctattttatgccggaagtgcag
gtggtctgcgtttacggcggtgcgaatatggaaaagcaggccaagcgcctcgccgagggc
tgtcagatcgtggtggcgaccccgggccgcctcatggaccactacaagcaccacaatatc
gacctcgaccatgtgacacaggtggtcctcgatgaggccgacgagatgctgaatatgggc
ttctataaggacgtgaagcatatcatcggcctgatgaaggcccgcaagtccctctcgatg
ttctcggccaccatcagccgcgaggtgatggacatcggctggatgtatcagaaggacgcc
gaggagatcacggtccagcccaaagaggagagccagcccaagatcacccagtatatgctg
gagacctccggacgcaacaaactgtccgatctggcccagatcatcattggggagggctac
aagcgggtcatggtcttctgcgataccaaattcaatacggcggctctggcgaaccagctg
gctcgtctgggcttctctgtggactgcctccacggcgacctctcccagaacgagcgcaac
cgcatcatgcagaacttccgtgacggaaagctgaatgtgctggtagccaccgatgtggcg
gcccgcggcatcgacgtctcagacgtggatgctgtcatcaactacgacgtccccggcgac
aatgagcattacacccaccgcatcggccgcacaggccgcgcaaagaaggagggtgtgagc
tacctgttctatgtgccggaggagaagaagcgggtgcaggagctgctgcgcctgacccgt
aacaccgatttatgtacgccggtacacttcgacttcaaccatgagcatatcgtggtggag
aaaaagcaggacagtgccgatcggttccaaatcaagtgctacttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (90)   
   KEGG ORTHOLOGY (1)   
   RefGene (87)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (105)   

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