KEGG   Flavobacterium psychrophilum JIP02/86: FP1967
Entry
FP1967            CDS       T00548                                 
Name
(GenBank) Probably involved in regulation of translation initiation
  KO
K06158  ATP-binding cassette, subfamily F, member 3
Organism
fps  Flavobacterium psychrophilum JIP02/86
Brite
KEGG Orthology (KO) [BR:fps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:fps03012]
    FP1967
Translation factors [BR:fps03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    FP1967
SSDB
Motif
Pfam: ABC_tran ABC_tran_Xtn AAA_21 AAA_29 MeaB Dynamin_N MMR_HSR1 RNA_helicase AAA AAA_23 RsgA_GTPase TsaE SMC_N VapE-like_dom NACHT AAA_18 DUF815 AAA_22 NB-ARC AAA_7 ABC_tran_CTD AAA_15 AAA_11 Neur_chan_memb
Other DBs
NCBI-ProteinID: CAL44031
UniProt: A6H107
Position
complement(1819572..1821482)
AA seq 636 aa
MLNIHNLSVSFGGTYLFEEVTFRMGAGDRVGLVGKNGAGKSTMLKILAGDFKPDSGSIST
AKEVQIGFLRQDIDFEEGRTVLEEAYQAFIEIKAVEKKLEEVNHQLVTRTDYESEEYSLI
IEDLSDLTHRFDLLGGYNYVGDTEKILLGLGFKREVFDNLTETFSGGWRMRIELAKLLLQ
ANDILLLDEPTNHLDIESIIWLESFLRNYPGVVVIVSHDKMFLDNVTNRTIEISLGKAYD
FNKPYSQYLELRHEIREKQLATQKNQAKKIEETEKLIEKFRAKASKASMAQSLIKKLDKV
ERIEVDEDDNSVMNISFPVSKVPGKVVVEAEYVTKAYGDKVILKDINLLVERGSKIAFVG
QNGQGKSTFIKAIVNEFEYQGSIKLGHNVQVGYFAQNQAEYLDGEITLLRTMEDAATDTN
RSKVRDMLGSFLFRGDDVEKKVKVLSGGERNRLALCKLLLQPINVLLMDEPTNHLDIKSK
NVLKAALQKFEGTLLLVSHDRDFLQGMSNLVYEFKDQKIKEYLGDINYFLEQRNLENMRE
VEKKDIEKKEAPTTNAKTTYEDQKKNKSLQNRLSKIESQIKQLEKDIQTDDRSLASNYDK
HIEDAKFFIAYNKKKSDLDKLLEDWELVQNEIDSNK
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgctaaacatacacaatttgtcagtttccttcggaggaacatatttatttgaagaagta
accttcaggatgggcgctggcgatagggtaggacttgtcgggaaaaacggagcagggaaa
tcgacgatgctaaaaatactagctggagattttaaaccagattcaggaagtatctctacg
gcaaaagaagttcaaataggattcttgcgccaagatatcgattttgaagaaggaagaacc
gttctcgaagaagcctaccaagcatttatagaaataaaagcagtcgagaaaaaactagaa
gaagtaaaccaccaactggttactagaacagattatgagagcgaagaatattcactaatt
atagaagatttatcagacttaacacaccgtttcgatttgttgggcggttacaattatgtg
ggagataccgaaaaaattcttttaggattgggttttaaaagagaagttttcgacaacctg
acagaaacattctctggcggatggcgtatgcgtatcgaattagctaaattattacttcaa
gcaaacgatatcttactactcgatgagccaaccaatcacttggatatagaaagtatcatt
tggttagaaagcttcttgcgcaattatccgggtgttgtggttattgtatcgcacgacaaa
atgtttctagataacgtaaccaatcgaaccatcgaaatctcactaggaaaagcctacgat
tttaataagccatattcccaatatttagaattgcgccacgaaattcgtgaaaaacaattg
gcaacccaaaaaaatcaagccaaaaaaatagaagaaaccgaaaagttaatcgaaaaattt
cgtgccaaagcatcaaaagcttctatggcgcaatcattaataaaaaaattagataaagta
gagagaatcgaagtcgatgaagacgataattcagtcatgaatatttcatttccagtatct
aaagtaccaggaaaagtagtagtcgaagccgaatatgttacaaaagcttatggcgacaaa
gttatcttaaaagacattaatttactagtagaaagaggaagcaaaattgcatttgttggg
caaaacggacaagggaaatctacttttatcaaagccattgttaatgagtttgaatatcaa
ggttcaatcaaactaggacacaatgtacaagtaggctattttgctcaaaaccaagcagaa
tatctagatggcgaaattaccttacttcgcaccatggaagacgccgcaaccgataccaat
cgtagtaaagtacgagatatgttaggatcattcttgtttcgtggcgacgatgtcgagaaa
aaagtaaaagtcctttcaggaggagagcgtaatcgcttggctttgtgtaaactattactg
cagcctatcaatgttttattgatggacgaacccacaaatcacttagatattaaatctaaa
aacgtcctgaaagccgctttgcaaaaatttgaaggaaccttacttttagtatctcacgac
agagatttcttacaaggaatgtcaaatttagtttacgaattcaaagaccaaaaaattaaa
gaatacttaggcgatattaattatttcttagaacaacgcaatctagaaaatatgcgtgaa
gtcgagaaaaaagacatcgaaaagaaagaagcaccaacaacaaatgcaaaaacaacctac
gaagatcagaaaaaaaacaaatcccttcaaaatcgtttaagtaaaatagaaagtcagata
aaacaattagagaaagatatccaaacagacgataggtcattagcctctaattatgacaaa
cacatagaagacgcaaaattcttcattgcctacaataagaaaaagtccgatctagacaaa
ttattagaagactgggaacttgtacaaaacgaaatagacagcaataaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (31)   

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