KEGG   Flavobacterium psychrophilum Z2: AMR72_10970
Entry
AMR72_10970       CDS       T04556                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
fpsz  Flavobacterium psychrophilum Z2
Pathway
fpsz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fpsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AMR72_10970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpsz03400]
    AMR72_10970
DNA repair and recombination proteins [BR:fpsz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AMR72_10970
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 HHH_2 5_3_exonuc UVR
Other DBs
NCBI-ProteinID: ALM49371
Position
2508829..2510625
AA seq 598 aa
MRTPLELQIQTLPDNPGVYQYFDKDDKLLYVGKAKNLKKRVMSYFNKVHDTGRTNVMVRK
IVSIKHIVVPTESEALLLENNLIKKLQPRYNIMLKDDKTYPWICIKREPFSRVFSTRKVI
KDGSEYFGPYTSFKTVHTLLDLIKELYPLRTCNYDLNETTIRSGKYKVCLEYHLGNCKGP
CEGHEPLSVYQDHVDAIRQILKGNFKESLKDFRKLMQDLAMDMRFEEAQKIKEKIEVLEN
YQARSTVFNPKISNLDVFTIISDESMAYVNFIQVSHGAIIRSHTMEIKKKLDEPDEEILE
LAVVELRDRFKLMSKEILVPFPISVGENITVTVPKLGDKKQILDLSERNARFFRMDQLKQ
IKIVDPDRHTNRIMAQMKADLRLPEEPRHIECFDNSNIQGTNPVSACVVFKDGKASKKDY
RHFNIKTVVGPDDFASMEEVVFRRYRRLLDENEPLPQLIIIDGGKGQLSSALKSIDALGL
RGKITILGIAKRLEEIFYPGDSIPLYLDKKSETLKIIQQLRNEAHRFGITFHRDKRSKAA
LQTSVETIPGIGEKTMVTLLKHFKSVKRMTAAPEDEIAKVVGPSKAKKITEFYKDKNK
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgcgtactcctcttgaacttcagatacaaaccctgcccgacaatccgggtgtttaccag
tattttgacaaagacgacaagctgctttatgtgggtaaggcaaagaaccttaaaaaaagg
gtgatgtcttattttaataaagtgcacgacaccgggcgaactaacgtgatggtgcgcaag
atcgtatctattaaacacattgttgtgcctaccgaaagtgaagccctgctgcttgaaaat
aaccttatcaagaaacttcagccgcgctacaacatcatgcttaaggatgataagacgtat
ccgtggatatgcataaagcgtgagccgttttcgagggtgttctctacccgaaaggtgata
aaggatgggtcggaatattttgggccttataccagtttcaagaccgtgcatacgcttttg
gatctgataaaagagctgtatccgttgcgtacgtgcaattacgaccttaacgagacaacc
atacgttccggaaaatataaggtgtgtttagagtaccatttaggtaactgcaaaggtccg
tgtgaaggtcacgagccattgagtgtgtaccaggaccatgtagatgccatccgtcagata
ttaaaaggaaattttaaagaatcgcttaaggatttccgcaagctgatgcaggatctggca
atggatatgcgctttgaagaagcccagaaaataaaagaaaagatagaagtactggaaaat
taccaggcacgaagcacggtttttaaccctaaaatatctaacctcgatgtgtttacaata
atttcagacgaaagtatggcctatgtaaacttcattcaggtgtcgcatggtgcaattatc
cgtagccatacgatggaaattaaaaagaagctcgacgaacccgatgaggaaatcttagag
ctggccgtggtagaactgcgcgaccgttttaaactgatgtcgaaagaaatactggttccg
tttcctataagtgtaggcgaaaatataacggttaccgtaccaaagctgggggacaaaaaa
cagattcttgacctttcggagcgtaacgcgcgtttcttccgaatggatcagctgaagcag
attaagattgttgaccccgaccgccataccaaccgtattatggcgcagatgaaagccgac
cttcgcctgcccgaagagccacgccatatagaatgttttgataactcgaacattcaggga
acaaaccctgtttcggcatgtgtggtgtttaaagatggtaaggcaagtaagaaagactac
cgtcattttaatataaaaaccgttgttggccccgacgattttgcttctatggaagaagtt
gtttttcgccgttaccgcaggctgcttgacgaaaacgaaccattgccgcagctgataatt
atcgacggtggaaaaggtcagttgtcctctgcattaaaaagtatagatgccttggggttg
cgtgggaaaattactatattgggcattgctaaacgattggaagaaattttctatccgggc
gactcgattccgctgtatctcgacaagaaatctgagacgctgaagatcattcagcaattg
cgaaatgaagcgcaccgttttggtattacctttcaccgcgataagcgaagcaaggccgcg
ctgcaaacatcggtggaaaccatacccggcataggcgagaagactatggtgacactgctg
aagcattttaaatcggtaaagcggatgaccgccgcacccgaggatgaaattgccaaagtt
gtggggccgtctaaagccaaaaaaataactgagttttacaaagacaagaataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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