KEGG   Flavobacterium psychrophilum Z2: AMR72_11645
Entry
AMR72_11645       CDS       T04556                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpsz  Flavobacterium psychrophilum Z2
Pathway
fpsz03410  Base excision repair
fpsz03430  Mismatch repair
fpsz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AMR72_11645
   03430 Mismatch repair
    AMR72_11645
   03440 Homologous recombination
    AMR72_11645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpsz03400]
    AMR72_11645
DNA repair and recombination proteins [BR:fpsz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AMR72_11645
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AMR72_11645
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AMR72_11645
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: ALM49494
Position
2669140..2670837
AA seq 565 aa
MRWTLTPKPDPLKVKHLSEALNVDAVVATLLVQRGIETYEEARTFFRPKLEDLHDPYLMK
DMDKAVARIEAAIAAVENILVFGDYDVDGTTAVSLVSSYLRSYYPNVATYIPDRYKEGYG
VSNAGIDFADDNGFTLIIALDCGIKSIDKVEYAKEKGIDFIICDHHRPGDVLPDAVAVLD
PKRADCSYPYDELCGCGVGFKLIQALGVNKGETINHFVPYLDLVATAIAADIVPITGENR
VLAKFGLDVINTFPRPGIKALIQNVKKQTLTISDVVFIVAPRINAAGRIKHGNHAVELLT
EFSLEEAEGFASQIEGLNADRKDLDKQITIEALQQIEHNSDQDRFTTVVYQEDWHKGVIG
IVASRLIETYYRPTLVFTKSGDKLAASARSVKDFDVYNALEACAEHIEQFGGHMYAAGLT
LKEEQYPLFRQKFEEVVQQTIHPDLLTPEISIDAEIDFDDITPKFHRLLKQFEPFGPGNM
SPVFMTRNIKDTGYGKAIGSDETHLRLFVRQGETGGYAAIGFGLAKKKDLACDGEYFDAA
YSIDENEWNGQVSLQLRLRDIRCEE
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgcgctggacccttacaccaaaacccgaccctcttaaagtaaaacatctttccgaagcc
cttaatgtagatgctgttgtagcaacattattagtgcagcgcggtattgagacgtacgag
gaggctcgaacatttttccgcccaaaactggaagacctgcatgatccctatctgatgaaa
gatatggacaaggcggtggcgcgcattgaagccgctattgcagccgtagaaaacatattg
gtgtttggtgactatgatgtggatggtacaacagctgtttctttggtgtcttcatatttg
cgatcgtattaccctaatgtagccacttatattcctgacaggtataaagagggctatggc
gtgtcgaatgccggaattgattttgcagacgataatgggtttaccctcatcattgcatta
gattgtggtattaaatcaattgataaagttgaatatgccaaagaaaaaggcatcgatttt
attatttgcgatcaccaccgcccgggagatgtattgcctgatgccgttgcagtactcgac
ccaaaacgtgctgattgttcctatccatatgatgaactctgcggatgcggtgttggcttt
aaactgattcaggcactcggagtaaacaagggtgagactataaatcattttgttccgtat
cttgatctggtggcaacagcaattgcggcagatattgtccccattacaggagaaaataga
gtactagccaaattcggactggatgttatcaatacatttccaaggccgggtataaaagcg
cttattcagaatgtaaagaagcaaacccttaccataagcgatgtagtgtttattgtagca
ccacgcattaatgccgccggacgtattaaacacggtaaccatgcggtagagttgcttacg
gaattcagcctagaagaagccgaaggttttgcttcgcagattgaagggcttaatgctgac
cgtaaagacctggacaaacaaattactatcgaagctttacaacaaatagagcataatagc
gatcaggatcgttttacgactgttgtctatcaggaggactggcacaagggtgtaattggt
attgtggcatcgcggctcatagaaacctactacaggccaacattggtgtttactaaaagt
ggcgataaattggcggcatcggcgcggtcagtgaaagattttgatgtgtataatgcactt
gaggcgtgtgctgagcatatcgaacaattcggggggcacatgtatgctgccggattgacg
cttaaagaagaacagtatcctttattcagacaaaaatttgaagaggtagtacagcaaacc
atacaccctgatttgctgacacccgaaatttcaattgatgcagaaattgattttgatgac
atcacaccgaaatttcatcgcctgttaaaacagttcgaaccttttggtccgggaaatatg
tcgcccgtgttcatgacacgtaacattaaagataccggttatggcaaagcaatagggtct
gatgaaacgcacttacgattgtttgtcaggcagggagaaaccggtggttatgcagccatt
ggttttggattggctaagaaaaaagatcttgcctgtgatggagaatatttcgatgctgct
tactctatagatgaaaacgagtggaacggtcaggtaagtttgcagttgaggttaagggat
atccgctgtgaagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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