KEGG   Fusarium pseudograminearum: FPSE_03968
Entry
FPSE_03968        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03013  Nucleocytoplasmic transport
fpu03015  mRNA surveillance pathway
fpu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FPSE_03968
  09122 Translation
   03013 Nucleocytoplasmic transport
    FPSE_03968
   03015 mRNA surveillance pathway
    FPSE_03968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_03968
   03041 Spliceosome [BR:fpu03041]
    FPSE_03968
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     FPSE_03968
Spliceosome [BR:fpu03041]
 Complex C
  Other components
   EJC/TREX
    FPSE_03968
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3 xRRM
Other DBs
NCBI-GeneID: 20362586
NCBI-ProteinID: XP_009255361
UniProt: K3VPS6
Position
3:complement(587129..587648)
AA seq 156 aa
MADVEMDVDVEAGSPPPPARNESDMQTHTKATAVRSIEGWIIIVTNVHEEADEETLQDLF
GEYGEIKNMHLNLDRRSGYVKGYALIEFTTLEEARAAIDGANNQKLLEQTISVDFAFVRP
PPGKPGRGRGAGGRNRGRSRSHSPEGKDERAGDERD
NT seq 471 nt   +upstreamnt  +downstreamnt
atggccgatgtggaaatggacgtcgacgtcgaggcgggctctccccctccccccgcgcgc
aacgaatccgacatgcaaacacacaccaaagccacagccgtccgctccatcgaaggctgg
atcatcatcgtcacaaacgtccacgaagaagccgacgaggagaccctacaagatctcttt
ggagagtacggcgagatcaagaacatgcacctgaacctcgaccgaagaagcggctacgtc
aagggatacgccctgattgaattcacaacactcgaagaagcccgagctgccatcgatggc
gcgaataaccagaagctactcgagcagactatctcggtggactttgctttcgtgcggccc
ccacctggtaagcctggtcgtggaagaggcgccggtggacgaaaccgaggacgaagcagg
agtcacagccccgagggcaaggatgaacgggcaggcgacgagcgggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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