KEGG   Fusarium pseudograminearum: FPSE_05135
Entry
FPSE_05135        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FPSE_05135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_05135
Enzymes [BR:fpu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     FPSE_05135
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FPSE_05135
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     FPSE_05135
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4
Other DBs
NCBI-GeneID: 20363753
NCBI-ProteinID: XP_009256528
UniProt: K3VJ36
Position
1:complement(6804262..6806410)
AA seq 698 aa
MYTQHSGQGQHGRMNGAGRGIPNMIYNYQHPSHQHPSQTQHHQGLQHDHGMPNVNGLAHH
SSFTPGGLSNSSPFAPNALQNGHSAGNRGQAPPNEMWQEQLRTHKESERAHAAMTDQQQP
HYYARLKASENRGIGGPPPSSLRAQPDDENDGVDRRRPLTVEKETRRQDWHNMDMSGQGL
RNLAPELFKYRFLNELFIASNKLKILPNAIGELRALRHLDASFNQIEEIPPEIGMCTYLK
NLHLFNNNIRILPNELGSLHLLEMLGIEGNPLDPDIKHEIMEKGTKSLITFLKENAPCPP
PPSPRKLVCIQEDVSPSLERIKVFSWNILCDKYATPQTYGYTPTNALNWDYRRSCILEEL
EIRDADFLALQEVSTDAFKEDLSPDLAQLDYKGVHWPKSRAKTMSEKDAQSVDGCAVFYK
QSKFILLDKQLIEFATIAINRPDMKNQHDVFNRVMPKDNIAVICFFESRLTGARIILVNA
HLTWDSALADVKVIQTGILMEHVTKLAEKYARWPAVKDKKMIVLPVGEDEVPVPQAEPGP
SQEYRTNTEIPLLVCGDFNSTEDSSVYELMSMGRVPPDHLDLSSFQYGSFTRDGIEHPFS
LRDAYAHIKHTADDMPFTNYTPGFADVIDYIWYSTNTLEVVDLLGPPDPEYLKRVPAFPN
WHFPADHIQIMSEFVIKGRKEKKHLPEREPDFGPGSRS
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtacactcaacactccgggcaaggtcaacatggtcggatgaacggtgccggccgaggc
ataccgaacatgatatacaactaccaacatccttcacaccaacacccctctcagacacaa
caccaccaaggacttcaacacgaccatggcatgcccaacgtcaacggtttggctcaccac
tcatcattcactcccggcggtctttcgaactcgagtccctttgctccgaatgcgctccaa
aatggccactcagctggaaaccgaggacaagcgcctccaaacgagatgtggcaggagcaa
ttaaggacgcacaaagagtctgaacgagcgcatgctgccatgaccgatcaacaacaaccg
cactactatgctaggctcaaggcgtcggaaaacagaggaattggcggcccaccaccgagt
agcttgcgtgctcagccggacgacgagaacgatggtgttgataggagacgacccctaact
gtggagaaggaaacgagacggcaagactggcacaacatggatatgagtgggcaaggcttg
cgaaacctggcaccggaattgttcaagtatcgcttcttgaatgagctcttcatcgcctcc
aacaagctcaaaatactacccaacgcaattggagaactgcgagcactacgccacctcgac
gcctccttcaaccagatcgaagaaataccccccgagatcggaatgtgcacctaccttaag
aacttgcaccttttcaataacaacattcgaattttgcccaacgaactgggatcgcttcac
cttcttgagatgcttggaatcgaaggtaaccctctggatccagatatcaaacatgagatc
atggaaaaggggacaaagagcctgatcactttcctcaaagaaaacgctccctgcccccct
cctccctcgccccggaaactcgtgtgcattcaagaggatgtatcgcccagcttggaaagg
atcaaggtgttttcatggaacattctctgcgacaaatatgcaacaccccagacctacgga
tatacaccaacaaacgctctcaattgggactatcgtagaagctgcattctggaagaactc
gaaattagggacgcagatttcctcgccctccaagaagtctctacggatgcgtttaaagaa
gacctcagccccgacctggctcagttggattacaagggtgttcactggcccaaatcgcga
gccaaaaccatgtctgaaaaggatgcccaatctgtggacggttgcgctgtcttttacaag
cagagcaagttcattcttctcgacaagcagctgatcgagttcgccactattgccattaac
cgacccgacatgaagaaccaacacgatgtcttcaatcgcgtcatgcccaaggacaacatt
gccgttatctgtttctttgagtcccgccttactggagctcgaattatcctggtcaatgcc
catcttacatgggattctgctctggctgatgtcaaggttatccagaccggtattctgatg
gagcacgttactaaacttgcggagaagtacgctaggtggcccgcagttaaggacaagaag
atgattgtactaccggtgggcgaagatgaggttcctgtgcctcaggctgagccaggtccc
agccaagaataccgcacaaatacagagattcctctacttgtctgcggtgacttcaactca
acagaagactcgtccgtgtacgagctgatgtctatgggacgtgtgcctccggatcatctc
gacttgagcagcttccagtacggtagcttcacacgcgacggtattgaacaccctttcagc
ctgagggatgcctacgcccacatcaaacacaccgccgacgacatgccattcaccaactac
acacctggcttcgccgacgtgattgattacatctggtactcgaccaacaccctggaggta
gtagacctactgggaccccctgatcctgaatatctcaaacgagttcccgcttttcccaac
tggcatttccccgccgaccacatccagatcatgtctgaatttgtgatcaaggggcgcaaa
gagaaaaagcaccttcccgaacgcgagcccgactttggtcccggatcacgcagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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