KEGG   Flavobacterium psychrophilum V3-5: IA03_02635
Entry
IA03_02635        CDS       T03659                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
fpv  Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:fpv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpv03032]
    IA03_02635 (gyrB)
   03400 DNA repair and recombination proteins [BR:fpv03400]
    IA03_02635 (gyrB)
Enzymes [BR:fpv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     IA03_02635 (gyrB)
DNA replication proteins [BR:fpv03032]
 Prokaryotic type
  DNA Topoisomerases
   IA03_02635 (gyrB)
DNA repair and recombination proteins [BR:fpv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      IA03_02635 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AIG29436
UniProt: A0A076P3N5
Position
587961..589904
AA seq 647 aa
MSDEIKKDNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMGGHC
DTIRVDINEDGSISVEDNGRGIPVGIHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSVVNALSNHLRATVHSSDGKIYEQEYEKGKALYPVKQIGETTKRGTIVTFYPDPSI
FTQTIEYSYDTLSARMRELSFLNKGITITFTDKREKDKDGNFVSEIFHSTEGLKEYIRYL
DGNREPIIAHVISMDNDKGEIPVEVALIYNTSYTENIFSYVNNINTHEGGTHLQGFRTGL
TRSLKKYADSSGMLDKLKFEISGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVVSPV
SQAVGDMIENYLEENPNDARIIVQKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSD
CSEQDPAKCEVFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMHHKVFENEEIRN
IFTALGVTIGTAEDSKALNLEKLRYHKVVIMCDADIDGSHISTLILTFFFRFMKELIEQG
HIYIATPPLYLVKKGNKKEYAWNEVQRDQANERMGGSATIQRYKGLGEMNAEQLWDTTLN
PEFRTLRQVNIDSLAEADRVFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgagcgacgaaattaagaaggataattattcagcagatagtattcaggcattagaagga
atggaacatgttcgcatgcgtccctcgatgtatattggagatgtaggtgttcgtggtttg
caccatttagtttacgaagttgtagataactctatcgatgaggcaatgggaggtcattgc
gatacgattcgtgtagatattaatgaagatggttctatttctgtagaagataacggacgt
ggtattcctgtcggaattcataaaaaagaaggcgtttcagctctagaagttgtaatgact
aaaattggtgctggaggaaaatttgataaagattcgtataaagtttctggaggattgcac
ggagtaggggtttctgtagtaaatgctttgtcaaaccacttgcgagcaaccgttcatagt
agcgacggaaagatttacgagcaagaatacgaaaaaggaaaagcactttatcccgtaaag
caaataggcgaaacgactaaacgtggaaccattgtaactttttacccagacccttctatt
tttacccaaaccatagagtattcttatgacactttatctgctcgtatgcgtgaattatct
tttttaaataaaggaatcaccattacttttacagataaaagagaaaaagacaaagacgga
aattttgtttcagaaatttttcattcaacagaaggactaaaagaatatatccgttattta
gatggaaaccgagagccaattattgcgcacgtaatttctatggataacgataaaggagag
attccagttgaggttgccttaatttataatacaagttatacagagaatattttttcttac
gtaaacaatatcaatacacacgaaggaggaacgcatttgcaaggttttagaactggttta
acccgttcgttaaagaaatatgcagattcgtctggaatgttagataaattgaaatttgaa
atttcaggagatgacttccgtgaaggattaacagcgattatttcggtaaaagttgctgaa
cctcaatttgaaggtcaaaccaaaaccaaattaggaaatagagaagtagtttctccagtt
tctcaagcggttggcgatatgattgaaaattatttggaagaaaatccaaatgatgcaaga
atcattgtgcaaaaagtaattttggcagcacaagcacgtcatgctgctaagaaagcccgt
gaaatggtgcagcgaaaaaccgtaatgggtggtggtggcttaccaggaaaactatcagat
tgttctgaacaagatccagcaaaatgtgaagtatttcttgttgagggagattcggcagga
ggaactgcaaaacaaggacgtgatagggcttttcaggcaattttgcctttgcgtggtaag
attttgaatgttgaaaaagcaatgcaccacaaagtttttgaaaacgaagagattcgtaat
atatttacagctttaggcgtaaccattggtactgctgaagacagtaaagcattaaaccta
gaaaaattacgttaccataaagtagtcattatgtgtgatgccgatattgatggtagtcat
atttctaccttaattctgacattcttcttccgttttatgaaagaactaatcgagcaagga
cacatatatatagcaacaccaccattatatcttgttaaaaaagggaataaaaaagaatac
gcctggaacgaagtacaacgagatcaagccaacgagagaatgggtggtagcgcaacaatt
caacgttataaaggtcttggagaaatgaatgcagaacaattgtgggacacaactttaaat
cctgaatttagaactttgcgtcaagtaaatattgatagtttagcagaagctgatagagtt
ttctcaatgttaatgggagatgaggttccgcctcgtagagaatttatcgaaaaaaatgca
gtgtacgcaaatattgacgcataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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