KEGG   Flavobacterium psychrophilum V3-5: IA03_06730
Entry
IA03_06730        CDS       T03659                                 
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
fpv  Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:fpv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fpv03009]
    IA03_06730
Enzymes [BR:fpv01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     IA03_06730
Ribosome biogenesis [BR:fpv03009]
 Prokaryotic type
  ribosomal protein modification factors
   IA03_06730
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TRAM CLP1_P
Other DBs
NCBI-ProteinID: AIG30183
UniProt: A0A076P520
Position
1457202..1458503
AA seq 433 aa
MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLKASGKNVVHEEEGNIVVINTCGFIDNAK
AESVNTILEYADKKERGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPALLKALG
ADYRHELLGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGKNVSQTIEKLVKEAEGLA
KNGVKELILIAQDLTYYGLDLYKKRALGELLEALVKIEGIEWIRLHYAFPTGFPMDVLEI
MKREPKICNYIDIPLQHISDSILKSMKRGTTREKTTKLLKDFRAAVPGMAIRTTLIVGYP
GETEEDFEILKEFVQEMKFDRMGCFAYSHEENTGAYELVDDVPDEVKQARSLEIMDLQSQ
ISWDLNQEKLGQTFRCIIDRKEGGHFVGRTEFDSPDVDNEVLIDATKHYVKTGEFVNIKI
IEATEFDLYGEPA
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgagaaccaaatcgttaaagaaaaacaaaatcaatgtaatcactcttgggtgttctaaa
aacgtgtatgacagcgaagtgcttatggggcaactcaaagccagcggaaaaaacgtggta
catgaagaagaagggaatattgtggtgataaatacttgcggatttatagataatgccaaa
gcagaatctgtaaatacaattttggaatatgctgacaaaaaagaacgtggattagttgac
aaagtatttgtaaccggatgtctatctgaacgttacagaccagatttagaaaaagaaatc
cccaatgtagaccaatattttggtactactgaattgcctgctttattaaaagctttagga
gcagattacagacatgaattattaggagaacgtttaaccacaacacctaagaactatgcg
tacctaaaaatttctgaaggttgcgaccgtccttgtagtttttgtgctattccgcttatg
cgtggcaaaaatgtatcgcaaaccatagagaaattagtaaaagaagccgaaggtttggct
aaaaatggtgtaaaagaactaattcttattgcccaagatttgacttattatggtcttgat
ttatacaaaaaaagagcactaggcgaattgctagaagcactagtaaaaatagaaggtatc
gagtggattcgtttgcattacgccttccctactggtttccctatggatgttcttgaaatc
atgaaacgagaacctaagatttgtaattatatagatattccgttgcaacacatttcagat
tctatcctaaaatcgatgaaacgtggaacaacaagagaaaaaaccaccaaattactaaaa
gattttcgtgcagccgttcctggaatggccattagaacaactctaattgtaggatatcct
ggagaaactgaagaagatttcgagattctgaaagaatttgttcaggaaatgaaatttgac
cgaatgggctgttttgcttattcgcacgaagaaaatacaggtgcttacgaattagtagat
gatgttccagatgaagtgaaacaagcacgttcgctagaaataatggatttacaatcgcaa
atttcttgggatttgaaccaagaaaaactaggacaaactttccgttgtattattgacaga
aaagaaggcggacattttgtaggaagaaccgaatttgatagtcctgatgtagataacgaa
gtacttatagacgctacaaaacattatgtaaaaacgggtgaatttgtaaatataaaaatt
attgaagctacagagtttgacttatacggcgaaccagcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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