KEGG   Flavobacterium psychrophilum V4-24: IA04_05080
Entry
IA04_05080        CDS       T03660                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
fpw  Flavobacterium psychrophilum V4-24
Pathway
fpw03030  DNA replication
fpw03430  Mismatch repair
fpw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IA04_05080
   03430 Mismatch repair
    IA04_05080
   03440 Homologous recombination
    IA04_05080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpw03032]
    IA04_05080
   03400 DNA repair and recombination proteins [BR:fpw03400]
    IA04_05080
Enzymes [BR:fpw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IA04_05080
DNA replication proteins [BR:fpw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IA04_05080
DNA repair and recombination proteins [BR:fpw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IA04_05080
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AIG36690
UniProt: A0A076P473
Position
1118859..1119977
AA seq 372 aa
MKFIVSSSYLLKQLQVLGSVINSSNTLPILDNFLFELKKNELLVSASDLETTMSASLTID
SDSQGSVAVPAKLLLEILKTFPEQPLTFTVEENNTIEISSQSGKYALAYAPGDEFPKAVN
LEEPSKTIVPAEVLSTAVSKTIFAAGNDDLRPVMSGVFFQFSPEGLIFVATDAHKLVKYA
RTDVKASQVADFIMPRKPLNILKGILATSNEEVTIEYNDSNATFSFDNYILTCRLIDGKY
PNYEAVIPKENPNKLMIERTQFLSSVRRVAIFSNKTTHQIRLKIAGTELNISAEDIDYSN
KAEERLTCDYQGDDMQIGFNSRFLLEMLGNLQSDMIMLEMSMPNRAGILTPIDGLDEGET
VTMLVMPVMLNN
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgaagtttatagtatcaagttcctatttattaaaacaattacaagttttaggaagcgtt
atcaatagtagtaatacattgcctattttagataatttcctatttgaattaaagaaaaac
gaattattagtttctgcttcagatctagaaaccaccatgtcagcctcgcttactatcgat
tcagatagccaaggaagcgttgccgttcctgcaaaattattactagaaatactaaaaact
tttccagaacaacccctaacctttacagttgaagaaaacaacaccatcgaaattagctca
caatcaggaaaatacgcactagcctatgctccaggtgacgaatttccaaaagctgtaaac
ttagaagaaccctctaaaactattgttcctgccgaagtattatcaacagcagtaagcaaa
acaatctttgccgctggaaacgatgacctacgcccagtaatgtctggtgtcttttttcag
ttttcgccagaaggattaatttttgtggctaccgatgcacataaattagtaaaatatgcc
cgtaccgatgtaaaagcatcgcaagttgctgattttattatgccaagaaaacctttaaat
attttgaaaggaattctagctacttcaaacgaagaagtaaccatcgaatataacgattcg
aatgctactttctccttcgataattatatattaacttgtagattaattgacggtaaatac
cctaattatgaagcagttatcccaaaagaaaatccaaataaattaatgatagagagaacg
caatttttaagttctgtacgtcgtgtggcgattttctctaacaaaacaacacaccaaatt
agacttaaaattgcaggaacagaattaaatatttctgcagaagacatagattattcaaac
aaagcagaagagcgtttaacttgtgattatcaaggtgatgatatgcaaataggtttcaac
tcacgtttcttgttagaaatgctaggcaacctacaatcagatatgattatgctagaaatg
tctatgccaaacagagcaggaattcttacccctattgatggtcttgacgaaggcgaaacc
gttactatgcttgttatgcctgttatgctaaacaattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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