KEGG T03281: FPG101

Flavobacterium psychrophilum FPG101: FPG101_01165

Entry

FPG101_01165      CDS       T03281

Name

(GenBank) ribonuclease III

K03685

ribonuclease III [EC:3.1.26.3]

Organism

fpy Flavobacterium psychrophilum FPG101

Brite

KEGG Orthology (KO) [BR:fpy00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpy03019]
    FPG101_01165
   03009 Ribosome biogenesis [BR:fpy03009]
    FPG101_01165
   03036 Chromosome and associated proteins [BR:fpy03036]
    FPG101_01165
Enzymes [BR:fpy01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     FPG101_01165
Messenger RNA biogenesis [BR:fpy03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FPG101_01165
Ribosome biogenesis [BR:fpy03009]
Eukaryotic type
  90S particles
   RNase
    FPG101_01165
Prokaryotic type
  rRNA processing factors
   FPG101_01165
Chromosome and associated proteins [BR:fpy03036]
Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     FPG101_01165

SSDB

Motif

Pfam:

Ribonucleas_3_3 Ribonuclease_3 dsrm XhoI

Other DBs

NCBI-ProteinID:

AIN70726

Position

264960..265700

AA seq 246 aa
MSFIKKIFLSSRSSEDGLFFSKLEKILGFKPLNLTHFRRAFTHRSMNKLDEKGNPMNYER
LEFMGDAMLGSVIAAHLFNMSPTGDEGYLTKMRSKIVSREHLNELGKDLNLIQFLESKVT
LQNFGENIHGNLFEAFVGAIYLDRGFVYCEKFIHKKVIKPYVDIDKLEGKVISYKSLLIE
WCQKEKRVFHYDIYEDEDAGKLKYFGVKLSIDGKVVAKARATSKKKAEEIASKRGYFVFQ
SEIDGK

NT seq 741 nt +upstreamnt +downstreamnt
atgagttttattaaaaaaatatttttaagttcccgttcttcagaggacgggctttttttt
agtaaactcgaaaaaatattaggatttaaacctttaaatcttactcattttcgcagagcc
tttacccatcgatcaatgaataagttagatgaaaaaggaaatccaatgaattatgagcgg
ctagaatttatgggcgatgctatgctgggaagtgttattgcagctcatttatttaatatg
tctcctacaggcgatgaaggatatttaactaaaatgagatctaaaattgtaagtcgtgaa
cacttaaacgaattaggaaaagatcttaatctgatacagtttttggaaagcaaagtaaca
cttcagaattttggagaaaacatacacggcaatctttttgaagcttttgttggagcgatt
taccttgatagaggttttgtgtattgcgagaaatttattcataaaaaagtcatcaaacct
tatgtagatattgataagttagaaggcaaagttattagctacaaaagcttacttatagag
tggtgtcagaaagaaaaaagggtatttcattacgatatttatgaagatgaagatgcaggg
aaactaaaatattttggtgtaaaactaagtattgatggtaaagttgttgcaaaagcccga
gccacatcaaaaaagaaggcagaagaaattgcctctaaaagagggtattttgtattccag
tcagaaatagacggaaaataa

All links

Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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