KEGG   Frankia casuarinae: Francci3_0007
Entry
Francci3_0007     CDS       T00320                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
fra  Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:fra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fra03032]
    Francci3_0007
   03400 DNA repair and recombination proteins [BR:fra03400]
    Francci3_0007
Enzymes [BR:fra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Francci3_0007
DNA replication proteins [BR:fra03032]
 Prokaryotic type
  DNA Topoisomerases
   Francci3_0007
DNA repair and recombination proteins [BR:fra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Francci3_0007
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C COMMD1_N
Other DBs
NCBI-ProteinID: ABD09401
RhizoBase: Francci3_0007
UniProt: Q2JH41
Position
8155..10659
AA seq 834 aa
MVDVLPPPPGDRIEPIGIEVEMQRSYLDYAMSVIVGRALPEVRDGLKPVHRRVLYAMYDG
GYRPDRGYFKCSRVVGDVMGNYHPHGDTAIYDTLVRLAQGWSLRYPLVDGNGNFGSPGND
PPAAMRYTEARMAPLAMEMLRDIDQETVDFAPNYDGRSQEPLVLPSRFPNLLVNGAGGIA
VGMATNIPPHNLREVAKGVRWALDHPDASDSELLEALIGLIKGPDFPTSGLIVGRNGIEE
AYRTGRGSIRMRAVVNVEENKGRTQLVVTELPYQVNPDNLAEKIAELVRDNRVTGIADVR
DETSARIGQRLVIDLKRDAVAKVVLNNLYKHTQLQDTFGVNMLAIVDGVPRTLRLDQMVR
YYVEHQIDVIVRRTRYQLRKARERLHVLDGLLIALDHLDEVINLIRNAESADVARGQLME
RFSLSEIQATAILDMQLRRLAALERQRIIDEAAELRAKISDLEAILASPTRQRQIIGEEL
AEVVEKFGDERRTRLVPFEGDMSIEDLIAQEDVVVTVTRGGYAKRTKTDLYRSQRRGGKG
VQGAALREDDIVEHFFVTTTHHWLLFFTNKGRVYRAKAHELPEQARSAKGQHVANILAFG
QDERIAEVIAVKDYEAAPYLVLATKRGLCKKTALHDFDSNRAGGLVAINLRDDDELIAAR
LVAPGDDLLLVSRNAQSIRFHADDEQLRPMGRATSGVIGMRFDAEDELLSMDVVVPGTTA
DLLVATSGGYAKRTPLAEYPVQGRGGKGVLTAKIVSTRGGLVGALVVDPDDQLYAIASNG
GVLRTVAKDVRRAQRQTMGVRLIDLESGVQVVGVARNADAEDTDARIDAGPQES
NT seq 2505 nt   +upstreamnt  +downstreamnt
gtggtcgacgtcctacctcctccccccggcgaccgcatcgagcccatcggcatcgaagtc
gagatgcagcggtcgtatctcgactacgccatgtcggtcatcgtcggccgtgcgctgccg
gaggtacgcgacgggctcaagcccgtccaccgccgggtcctctacgccatgtacgacggc
ggctaccgccccgaccgcggatacttcaagtgctcccgcgtggtcggggacgtcatgggt
aactaccacccccatggcgacacggcgatctacgacaccctcgtccggctcgcgcagggc
tggtcgttgcgctacccgctggtcgacgggaacggcaacttcggctcgcccggcaacgat
ccgcccgccgccatgcggtacaccgaggcgcggatggcgcccttggcgatggagatgttg
cgtgacatcgaccaggagacggtcgacttcgccccgaactacgacgggcgttcgcaggag
ccgcttgttctgcccagccggttcccgaacctgctcgtcaacggcgccggcggcatcgcg
gttggcatggcgacgaacatcccgccgcacaacctgcgcgaggtcgcgaagggcgtgcgg
tgggcgctcgaccacccggacgcgagcgactccgagctgcttgaggcgctgatcggcctg
atcaagggtccggacttcccgacctcggggctcatcgtcggccgtaacggcatcgaggag
gcctaccgtaccggccgcggcagcatccggatgcgggcggtggtgaacgtcgaggagaac
aagggccgcacccagctcgtcgtcaccgagctgccctaccaggtgaacccggacaacctc
gccgagaagatcgccgaactggtccgggacaacagggtcaccggtatcgccgacgtccgg
gacgagacctcggcgcgcatcggccagcggctggtcatcgacctcaagcgcgacgccgtc
gccaaggtcgtgctcaacaacctctacaagcacacccagctccaggacaccttcggcgtc
aacatgctggcgatcgtcgacggcgtgccgcgtaccctgcgcctggaccagatggtccgc
tactacgtcgagcaccagatcgacgtcatcgtccgccggacccgctatcagctgcgcaag
gcccgcgagcggctgcacgtcttggacggtctgctgatcgcgctggatcacctcgacgag
gtcatcaacctcatccgcaacgccgagtcggcggacgtggcccgcggccagctgatggaa
cgcttctcgctgtcggagatccaggccaccgccatcctcgacatgcagctgcgccggctc
gccgccctggaacgtcagcggatcatcgacgaggcggccgaacttcgcgcgaagatctcc
gatctggaggcgatcctggcctcgccgacccggcagcggcagatcatcggcgaggagctc
gccgaggtcgtcgagaagttcggcgacgagcggcggacccgtctcgtcccgttcgagggc
gacatgtccatcgaggacctgatcgcccaggaggatgtggtcgtcaccgtcacccgcggt
ggctacgccaagcgcaccaagactgacctctaccgctcgcagcgccgcggcggcaagggc
gtgcagggcgcggcgctgcgcgaggacgacatcgtcgagcacttcttcgtcacgaccacc
caccactggctgctgtttttcacgaacaagggccgggtgtaccgggcgaaggcgcacgag
ctgcccgagcaggccaggtcggccaagggtcagcacgtcgcgaacatcctggccttcggg
caggacgagcggatcgccgaggtcatcgcggtcaaggactacgaggccgccccctacctg
gtcctggcgaccaagcgcgggctgtgcaagaagaccgcgctgcatgacttcgactcgaac
cgggccggtggcctggtggcgatcaatctgcgcgacgacgacgagctgatcgccgcccgg
ctcgtggcgcccggcgacgatctgctcctggtcagccgtaacgcccagtcgatccggttc
cacgccgacgacgagcagctgcggccgatgggccgggcgacctcgggtgtgatcggtatg
cggttcgatgccgaggacgaactgctgtccatggacgtcgtcgtgccgggtacgacggcg
gatctgctcgtcgccacctccggtggatacgcgaagcggacgccgctggccgagtacccg
gtgcagggccgtggtggcaagggcgtgctgaccgctaagatcgtctcgactcgcggtggt
ctggtgggggcactcgtcgtcgatcccgacgaccagctctacgccatcgcctccaacggg
ggcgtattgcggaccgttgccaaggatgtacggcgggcgcagcggcagaccatgggagtc
cggctcatcgatctggagtccggggtgcaggttgtcggagtcgcacgtaatgctgatgcg
gaggacaccgacgctcgtatcgacgccgggccccaggaaagctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (126)   
   KEGG ORTHOLOGY (1)   
   RefGene (122)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (136)   

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