KEGG   Frankia casuarinae: Francci3_1424
Entry
Francci3_1424     CDS       T00320                                 
Name
(GenBank) Isoleucyl-tRNA synthetase
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
fra  Frankia casuarinae
Pathway
fra00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:fra00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Francci3_1424
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:fra01007]
    Francci3_1424
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fra03016]
    Francci3_1424
Enzymes [BR:fra01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     Francci3_1424
Amino acid related enzymes [BR:fra01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   Francci3_1424
Transfer RNA biogenesis [BR:fra03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Francci3_1424
 Prokaryotic type
   Other AARSs
    Francci3_1424
SSDB
Motif
Pfam: tRNA-synt_1 DUF5915 Anticodon_1 tRNA-synt_1g tRNA-synt_1e GP52
Other DBs
NCBI-ProteinID: ABD10801
RhizoBase: Francci3_1424
UniProt: Q2JD41
Position
complement(1714744..1717953)
AA seq 1069 aa
MSTPLRHPTFAPLPAQVDLPALERETLARWRDTKVFHRSLEATADRPLWVFYEGPPTANG
RPGAHHVEARVFKDLFPRYRTMKGYHVPRRAGWDCHGLPVELAVEKELGFTSKNDIEAFG
IAEFNARCRESVLRHVADFSAMTERMGYWVDLDGAYRTMDTSYVESVWWSLKQIFDQGLL
VEDFRVTPYCPRDETPLSDHEVSQGYSDVDDPSVYVRFPLVADALGLAGQGAQLLVWTTT
PWTLVSNTAVAVHPEVEYVLARAGDGELFVVAEPLVTAALGEDAEIVERFRGAELAGARY
TRPFELLAAERFAAGTGVPHSVVLADYVTTTDGTGLVHQAPAFGAEDLAVCRASGLPVVN
PIGTDGRFLADVPLVGGMFFKDADAPLTADLRERGRLWRASTYTHSYPHCWRCHTPLIYY
PLPSWYIRTTAIRDELLAQNERTTWHPERIKTGRYGEWLRGNVDWALSRNRYWGTPLPVW
RCDDDPTHLVCVGSLAELSELAGRNLADLDPHRPFVDEVTGTCPTCGGASHRVPEVIDVW
YDSGAMPFAQWGAPHHNLAAFTRQYPAQYICEAIDQTRGWFYTMMAVGTLVFGRSSYETV
LCLGLLLDADGRKMSKHLGNVLDPFELFERHGADAVRWLMLAGGSPWADRRVSHEAIEDI
VRKVLLTYWNTSSFFALYAGAAGWRPGADPAADPRATPPARRHVLDRWALSELAATVAEV
DDALENFDSLRAGRRIARFVDDLSNWYVRRSRRRFWAGDADALSTLHTCLDALTRVMAPF
TPFLTDWLWSRLFADASPRTPDSVHLAAWPELPAGLHTPELSEQMDLVRRIVELGRAARA
ASGVRTRQPLPRAVVGASAFDELSPELIAQITEELNVTTVEPATSEVVDISVKPNFRALG
RRFGRNTKAAAAAIAAAGPPVNGRLTVTVDGEDVELSGDELIITETPRQGWAVTAESGLS
VALDLEISPQLARAGLARDVVRVLQDARKAAGLEITDRVDVSWAATREETALALRTHGQT
VAEEVLAVSFTEAARTELPAAQPRETAARSAAEELGLAFTLTRHETTGG
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgagcacccctctgcggcatcccaccttcgctccgctgcccgcccaggtggacctgccc
gccctggagcgggagacgttggcccgctggcgcgacaccaaggtgttccaccgttcgctg
gaggccaccgcggaccgcccgctgtgggttttctacgagggcccacccaccgccaacggc
aggccgggggcgcaccacgtggaggccagggtcttcaaggacctgttcccccgctaccgg
acgatgaagggctaccacgttccccggcgggcgggctgggactgccacgggctgcccgtc
gagctcgcggtcgagaaggagctcggcttcaccagcaaaaacgacatcgaggcgttcggc
atcgccgagttcaacgcccggtgccgcgagtcggtgctgcgccatgtcgcggacttctcc
gcgatgaccgagcggatgggctattgggtcgacctcgatggcgcctaccgcaccatggac
accagctacgtcgagagcgtctggtggtcgctcaagcagatcttcgaccagggcctgctg
gtcgaggacttccgggtcaccccgtactgcccgcgcgacgaaacgccgcttagtgaccac
gaggtgtcccagggctactcggacgtcgacgacccctcggtctacgtccgtttcccgctc
gtcgccgacgccctgggcctcgccgggcagggtgcgcagctgctggtatggacgacgacc
ccgtggacgctggtgtcgaacacggcggtggccgttcatccggaggtggagtacgtcctg
gcccgcgcgggggacggggagttgttcgtcgtcgccgaaccactggtcaccgcggccctc
ggcgaggacgccgagatcgtcgagcggttccgcggggcggagctggccggtgcccgctac
acccgcccgttcgagctgctggcggccgagcggttcgcggccggcaccggcgtcccgcac
tcggtcgtgctcgccgactacgtgacgaccacggatggcacgggcctggtccaccaggcg
ccagcgttcggcgcggaggacctcgcagtctgccgggcgagcgggctgccggtggtgaac
ccgatcgggacggacggtcgcttcctcgccgacgtccccctggtcggcgggatgttcttc
aaggatgccgacgcgccgctgaccgccgacctgcgcgagcggggccggctgtggcgggcg
tcgacgtatacgcacagttatccgcactgctggcgctgtcacacaccgttgatctactat
ccgctgccgtcctggtacatccggaccaccgccatccgcgacgagctgctggcgcagaac
gagcggacgacctggcaccccgagcggatcaagaccggtcggtacggcgagtggctgcgc
ggcaacgtcgactgggcgctgtcccgcaaccgatactgggggacaccgctgccggtctgg
cgctgcgacgacgaccccacccacctggtgtgcgtcgggtcactcgcggagctctccgag
ctcgccgggcggaacctggccgacctcgacccgcaccgcccgttcgtcgacgaggtcacc
gggacctgcccgacctgtggcggcgcctcgcaccgggtgcccgaggtgatcgacgtctgg
tatgacagcggcgcgatgccgttcgcccagtggggcgccccgcaccacaacctcgcggcg
ttcacccggcagtacccggcgcagtacatttgcgaggcgatcgaccagacccgcggctgg
ttctacacgatgatggcggtcggcacgctggtgttcggccgctcctcctacgagacggtg
ctctgtctcggcctgctcctggacgccgacggccgcaagatgagcaagcatctcggcaac
gtgctcgatcccttcgagctgttcgagcggcacggcgcggacgcggtccgctggctgatg
ctcgccggcggctcgccgtgggcggaccgccgggtgagtcacgaggcgatcgaggacatc
gtccgcaaggtcctgctcacctactggaacacctcgtccttcttcgctctctatgccggg
gcagccggctggcgcccaggcgcggacccggccgcggacccgcgcgcgacaccgccggcc
cgacggcacgtgctggaccgctgggcgctgtccgagctcgcggccaccgtcgccgaggtg
gacgatgcgctggagaacttcgactcgctgcgggccgggcggcggatcgcccggttcgtc
gacgacctgtccaactggtacgtccgccggtcccgccgccggttctgggccggcgacgcc
gacgccctgagcaccctgcacacctgcctggacgcgctgacccgggtgatggcgccgttc
acgccgttcctcaccgactggctgtggtcacggctgttcgccgacgcatccccgcggacc
cccgactcggtgcacctggccgcctggcccgagctcccggcggggctgcacacgccggag
ctctcggagcagatggatctcgtccggcggatcgtggaactcggccgcgccgcccgggcc
gccagcggggtgcgcacccgccagccgttgccgcgggcggtcgtcggcgcgagtgccttt
gacgagctctcccccgagctgatcgcgcagatcaccgaggagctcaacgtgaccacggtg
gagccggcgacctcggaggtcgtcgacatctcggtgaagccgaacttccgggcgctgggg
cggcgcttcggcaggaacaccaaggcggccgccgcggccatcgcggccgccggtcctccc
gtcaacggacggctcaccgtcaccgttgacggggaggacgtcgagctgtccggggacgag
ctgatcatcacggagacgccgcggcagggctgggcggtcaccgccgagtccgggctctcc
gtcgccctcgacctggagatctccccgcagctcgcccgcgccgggctcgcccgcgacgtc
gtccgggtgctccaggacgcgcgcaaggcggcggggctggagatcaccgaccgggtggac
gtctcctgggcggcgacgcgcgaggagaccgcgctcgctctgcgtacccacggtcagacg
gtggccgaggaggtgctggcggtctccttcaccgaggcggcccgcacggagctacctgcg
gcgcagccgcgcgagacggcagcccgctcggcggccgaggagctgggcctggcgttcacg
ctcacccggcacgagacgaccggcggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (50)   

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