KEGG   Frankia casuarinae: Francci3_1626
Entry
Francci3_1626     CDS       T00320                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
fra  Frankia casuarinae
Pathway
fra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Francci3_1626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fra03400]
    Francci3_1626
DNA repair and recombination proteins [BR:fra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Francci3_1626
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Francci3_1626
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C UVR ResIII DEAD AAA_16 AAA_22 AAA_30 AAA_5 DUF87 Helicase_RecD fvmX5
Other DBs
NCBI-ProteinID: ABD11002
RhizoBase: Francci3_1626
UniProt: Q2JCJ0
Position
complement(1953231..1955375)
AA seq 714 aa
MLEAVSTTFERPTIDIERTRAPFQVVSDFSPSGDQPAAIDELARRVGAGESDVVLLGATG
TGKSATTAWLVERLQRPTLVMAPNKTLAAQLANEFRELLPHNAVEYFVSYYDYYQPEAYI
AQTDTYIEKDSSINEEVERLRHSATMNLLTRRDVVVVASVSCIYGLGTPQEYIDRMVRLR
VGDEIERDLLLRRFVDVQYTRNDLAFTRGTFRVRGDTVEIFPVYEELAVRVEMFGDEIER
LTYLHPLTGEVVSEAEEIYVFPATHYVAGPERMERAIAGIEAELAERLATMERQGRLLEA
QRLRMRTTYDIEMMRQVGFCSGIENYSRHIDGREAGSPPHTLLDYFPDDFLLVIDESHNT
VPQIGGMYEGDMSRKRNLVEHGFRLPSAMDNRPLRWEEFLERIGQTVYLSATPGPYELGR
SVGVVEQIIRPTGLLDPEVVLKPTKGQIDDLVHEIRLRAERDERVLVTTLTKKMAEDLTD
YLLELGIRVRYLHSEVDTLRRVELLTELRRGEFDVLVGINLLREGLDLPEVSLVSILDAD
KEGFLRSDKSLIQTIGRAARNVSGQVHMYADAITPSMRRAIDETNRRREKQIAYNTERGL
DPQPLRKKVVDILDDMVRQSADGELIGGGGRSQSRGKAPVPGMKSRAGREGAVGRYAAEL
AGLPSHELAQLIRQLDDQMHEAAKELQFELAARLRDEIAELKKELRGMGAAGVQ
NT seq 2145 nt   +upstreamnt  +downstreamnt
gtgctagaagccgtgagcacaacgttcgaacggcccaccatcgacatcgagcggacgcgg
gcgccgtttcaggtcgtgtccgacttctccccgtcgggcgaccagcctgccgccatcgac
gagctggcccggcgggtcggggccggcgagtccgacgtcgtcctcctcggcgccaccggc
accggaaagtccgcgaccaccgcgtggctggtcgagcgcctgcagcggccgacgttggtg
atggccccgaacaagacgctcgccgcgcagctcgccaacgagttccgggagctgctgccg
cacaacgccgtcgagtacttcgtctcgtactacgactactaccagcccgaggcgtacatc
gcgcagacggacacctacatcgagaaggactcctcgatcaacgaggaggtggagcggcta
cggcactcggcgacgatgaacctgctcacccgtcgggacgtcgtcgtggtcgcgagcgtc
agctgtatctacggcctcggcacaccgcaggagtacatcgaccggatggtgcggctgagg
gtcggcgacgagatcgagcgggacctgctgctgcgccgcttcgttgacgtgcagtacacc
cgcaacgacctcgccttcacccgcgggacgtttcgggtccggggggacacggtggagatc
ttcccggtctacgaggagctcgccgtccgagtcgagatgttcggcgacgagatcgagcgg
ctcacctacctgcatccactgaccggggaggtcgtcagcgaggcggaggagatctacgtc
ttcccggccacgcactacgtcgccgggccggagcggatggagcgggcgatcgccggcatc
gaggcggagctcgccgagcggctggccaccatggagcggcagggcaggctgctggaggca
cagcggctgcggatgcgcaccacctacgacatcgagatgatgcgccaggtcgggttctgc
tcgggcatcgagaactactcccggcacatcgacggccgcgaggccgggagcccgccgcac
accctgctcgactacttccccgacgacttcctgttggtgatcgacgagtcgcacaacacc
gtcccgcagatcggcgggatgtacgagggcgacatgtcccgcaagcgcaacctcgtcgag
cacgggttccggctgcccagtgccatggacaaccgcccgctgcggtgggaggagttcctc
gagcgcatcggccagacggtctacctgtcggcgaccccgggcccctacgagctgggccgg
tccgtcggcgtcgtcgagcagatcatccggcctaccggcctgctcgaccccgaggtcgtg
ctcaagccgacgaaggggcagatcgacgatctcgtccacgagatccggctgcgcgccgag
cgggacgaacgggtcctggtcaccacgctgaccaagaagatggccgaggatctcaccgac
tacctgctcgaactcggcatccgggtgcggtacctgcacagcgaggtggacaccctgcgc
cgggtggagctgctcaccgagctgcgccgcggcgagttcgacgtgctcgtcgggatcaac
ctgctccgcgagggtctcgacctgccagaggtgtcgctggtgagcatcctcgacgccgac
aaggagggcttcctgcgctcggacaagtcactgatccagacgatcggccgggccgcccgt
aacgtgtccgggcaggtccacatgtacgcggatgcgatcaccccgtcgatgcgccgcgcc
atcgacgagacgaaccggcggcgcgagaagcagatcgcctacaacaccgagcgcgggctg
gatccccagcccctgcgcaagaaggtcgtcgacatcctcgacgacatggttcgccagtcg
gccgacggcgagctgattggcggcggcggccgatcgcagtcccgcggcaaggccccggtt
ccggggatgaagtcgcgcgccggcagggagggcgccgtcggccggtacgccgccgaactc
gccggcctgccctcccacgaactcgcgcagcttatccgccagctcgacgaccagatgcac
gaggcggcgaaggagctgcagttcgagctggccgcccggctgcgcgacgagatcgccgag
ctgaagaaggagctgcgtggcatgggcgccgccggcgtgcagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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