KEGG   Francisella frigiditurris: KX01_1785
Entry
KX01_1785         CDS       T05636                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
frc  Francisella frigiditurris
Pathway
frc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:frc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KX01_1785 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:frc03019]
    KX01_1785 (rnr)
   03016 Transfer RNA biogenesis [BR:frc03016]
    KX01_1785 (rnr)
Enzymes [BR:frc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     KX01_1785 (rnr)
Messenger RNA biogenesis [BR:frc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KX01_1785 (rnr)
Transfer RNA biogenesis [BR:frc03016]
 Prokaryotic type
  tRNA degradation factors
   KX01_1785 (rnr)
SSDB
Motif
Pfam: RNB S1 CSD2 RNase_II_C_S1 TFIIE_beta
Other DBs
NCBI-ProteinID: APC96465
UniProt: A0A1J0KRU3
Position
complement(1776159..1778459)
AA seq 766 aa
MSKYNIENDPNKELEAQKYTNPIPSREFILKYLKDLGFPATIENIAQALEIDKRSQLEGL
INRLGAMDRDGQVVKDKSFYRLADYKHLYITSKVRSDKDGRLVLFSHVEQAEVVISSTYS
KMLFVGDEVAAKIIGLNKKNQLEAEVTTILKRNTKTLVGYYDTCFDGHFLRPVSKNISSN
IILLPPREKIEQHSLIEAEIIVQPSVIGAAVGRFLRIVEEMSPVKEAMMIASKKYDLTEE
WSKKALKYLEKVSEDVKLENRVDLRSLDFVTIDGEDAKDFDDAVYATKTKTGGWKLYVAI
ADVSNYVRKDTALDLDAKKRSTSVYFPGYVIPMLPEKLSNELCSLQPKVDRYSLVCEMNI
SSNGALSRYKFYSAVIRSKARLTYTEVANLLDKKKNSIVEKSPEVIPSLFTLYDLYKILH
QARDERGAIDFDTVETQILLDEHNHIESIVPRHRNDAHRLIEECMLIANTAAAKFMIKHK
KTSPFRVHSEPKEEKMLALKKYLGSQGIHLSQGKDGKVTPQAISEMLESVKDRKNFDDIQ
LMTLRSMNQAVYSIDNQGHFGLAYKAYTHFTSPIRRYPDLVVHRLIKSTIDEYGYGGSDY
KAGELAAICDNASNQERNADGASKQVENWLKCYFMKDYIGEVLDAHIAHINGLGIFAELK
NMYIEGLIHVSAIKGDYYIFDEPKNILIGKRTNRVFRLGQEITVRVVRVDLDKIHIDFEL
VDSKTDPELEKSLTPRKSKRAKFKASRKRSERKKRAKKKKISELES
NT seq 2301 nt   +upstreamnt  +downstreamnt
gtgagtaaatacaatattgaaaatgaccctaataaagagttagaggcacaaaaatacacc
aacccaattccaagtagagagtttattctcaaatatcttaaagatcttggttttccagca
acgatagagaatattgcacaagctttggaaatagataaaagatcacagcttgaaggtctt
atcaatagacttggggctatggatagagatggacaggttgttaaagataaatcattttat
agattagctgattataagcatctatatataacatcaaaagtaagatctgataaagatggg
cgactagtcttattctctcatgttgagcaagctgaagtagttatttcatcaacatattca
aagatgttatttgtgggagatgaggttgcagctaagattattggtttgaataagaaaaat
caattagaagcagaagtgacaactattttaaaaagaaatacaaaaactttagttggttat
tatgatacctgctttgatggtcattttttaagaccagtaagtaaaaatataagttctaat
attatcttattgcctcctagagaaaaaatagagcaacattcgcttattgaagctgagatt
atagttcaaccaagtgttataggcgcagccgtaggaagatttttaagaattgtggaagaa
atgtctcctgttaaagaagctatgatgatagctagtaagaagtatgatttaacagaggag
tggagtaaaaaggccttaaaatatttagaaaaagtatctgaagatgtgaagttagaaaat
agagtggatttaagatcactagattttgtaactatagatggtgaagatgctaaagatttt
gatgatgctgtttatgcaacaaaaacaaagactggtggttggaagttatatgttgccata
gcagatgtttctaattatgtaagaaaagatactgctttagacctagatgctaaaaagaga
tctacatcagtatatttccctggctatgtaataccaatgctaccagagaaattatcaaat
gaactatgttcgttacaacctaaagtcgatagatattcactggtatgtgaaatgaatatc
agtagtaatggagcactttcaagatataagttttattctgcggttattagatcaaaagca
agacttacttatactgaggttgctaacttgttggataagaagaaaaattctattgtagaa
aaatccccagaagttatccctagcttatttactttatatgatttatataaaatattacat
caggctagagatgagcgtggcgctatagattttgatacggttgaaacgcaaatacttctt
gatgaacataatcatattgagtcaatagttccaagacatagaaacgatgcacatagatta
attgaagaatgtatgcttatagcaaatacagcagcagctaagtttatgattaagcataaa
aaaacttcaccatttagagttcatagtgaacctaaagaagaaaaaatgcttgcgctaaaa
aaatatttgggctctcaaggaatacatctatcacaaggtaaagatggaaaagtcacacct
caagcaatatctgaaatgcttgaaagtgttaaagatcgtaaaaactttgatgatattcaa
ttgatgactttaagaagtatgaatcaagctgtttatagtattgataatcaaggacacttt
ggattagcatataaagcttatactcattttacctctcctataagaagatatcctgattta
gtagtccataggcttataaaatcaacaattgatgaatatggctatggaggcagcgattat
aaagcaggagaattagctgcaatttgtgataatgcatctaatcaagaaagaaatgctgat
ggtgcttctaaacaagttgaaaattggctgaagtgctacttcatgaaagattatatcgga
gaagttttagatgctcatatagcacatattaacggtttagggatattcgctgaattaaaa
aatatgtacatagaagggcttatccatgtttcggctattaagggagactattatattttt
gatgagcctaaaaatattcttataggaaagagaactaatagagtatttagattaggtcaa
gaaataacagtacgcgttgtaagagttgatcttgataaaatccatatagattttgaattg
gttgatagtaagactgatcctgaattggaaaaatctttaacaccaagaaaaagtaaaaga
gctaaatttaaggcatctagaaaacgttcagaaagaaagaaaagagcaaaaaagaaaaaa
ataagtgagctcgagtcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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