KEGG   Faecalibaculum rodentium: AALO17_09520
Entry
AALO17_09520      CDS       T04268                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
fro  Faecalibaculum rodentium
Brite
KEGG Orthology (KO) [BR:fro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fro03032]
    AALO17_09520
   03400 DNA repair and recombination proteins [BR:fro03400]
    AALO17_09520
Enzymes [BR:fro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AALO17_09520
DNA replication proteins [BR:fro03032]
 Prokaryotic type
  DNA Topoisomerases
   AALO17_09520
DNA repair and recombination proteins [BR:fro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AALO17_09520
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim DUF1272 zf-ribbon_3 ADK_lid DNA_ligase_ZBD Zn-ribbon_8 PaRep2b YjdM_Zn_Ribbon Zn_Tnp_IS1 Toprim_4
Other DBs
NCBI-ProteinID: AMK54086
UniProt: A0A140DTV9
Position
875183..877363
AA seq 726 aa
MKKHLVIVESPSKSKTIEKYLGSGYKVVSSKGHICDLSTSGKDRLGVDVEHDFKPTYRVP
KEKKETVKELRELAEKSQDVYLASDPDREGEAIAWHLARELGLSVDDDNRIVFHEITKPA
IEAAMKEPKKIDMDLVKSQETRRILDRIIGFKLSKLLQNKIQSKSAGRVQSVALRLIVER
ENEIRKFKPEEYWSIHGDITKGRKTFTADLAKVDGKKPKIRNQEEAQAILEDAGTTFTVS
QVKTRSRRKGPKLPFTTSTLQQEASTKLGFGARKTMSVAQKLYEGIDLGDHTEGLISYMR
TDSTRLSGLFVKDAEDAIEKEYGKAYKGKAHMHNSTNAQDAHEAIRPTSINNTPEAVKPY
LTGEQYRLYSLIYARTMASLMADAKFDVTSILFQAGNCEFAATGQVMTFDGYYKVYGKYE
KASTELLPALEEGEVFENVPVISRQHFTEPPARYTEARLIKELEEKSIGRPSTYATIIDT
LQKRGYATLDKVSETSRTKVFTPTEQGVLTDQKLQEFFSKIINVEYTADMEKTLDVIAEG
DEDYIKFLHEFYDDFEPLVDKAYEDMPKKELERVGRTCPQCGGELVYRNGRFGKFISCIN
FPKCRYSETDETDIPEAREHRTCPNCGADMIIKKGRFGPFWACSNYPECKTIVPLKEKAK
PEPTGEKCPECGGDLVRRKSRFGTWFVGCSNYPKCRYIKKEPKKKAPETLDAAEEKTESS
RGEPHA
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgaaaaagcatctggtaatcgtggagtcaccctccaaatcgaaaacaatagaaaaatac
ctcggaagcggctacaaagtggtttcttccaaaggccacatctgtgacctgtccacatcc
ggcaaggaccgccttggcgtggatgtggaacatgacttcaagcccacgtaccgggttccg
aaggagaagaaggaaactgtcaaggaactcagggaactggcagagaagagccaggatgtc
tatctggcaagcgaccctgaccgggaaggggaagccattgcctggcacctggcccgggaa
ctggggctgagtgtcgacgatgacaatcgcatcgtgtttcatgaaatcacgaagccggcc
atcgaagcggcaatgaaagaacccaagaaaatcgatatggacctggtgaagtctcaggaa
acccgccgcatcctggacaggatcatcggattcaagctctccaagcttctccagaacaag
atccagtcaaaatccgccggccgtgtgcagtcggtggcactgcgtctgattgtggagcgt
gaaaacgagatcaggaaattcaagcctgaagaatactggtcgattcacggtgacatcaca
aagggacgcaagacattcacggcggatctcgccaaagtggacggcaaaaaaccgaaaatc
cgcaaccaggaagaggcacaggccattctcgaggatgcaggcacgacctttaccgtttct
caggtcaagacccgcagccgccgcaaggggccgaagctgcctttcacgacatccaccctg
cagcaggaagccagtaccaaactcgggttcggtgcccggaaaacgatgtccgtggcacag
aagctgtatgagggaatcgacctgggagatcacacagaaggtctgatttcctatatgcga
acggattccacccgtctttccggcctgtttgtgaaggatgccgaggacgcgatcgagaag
gagtatggcaaggcctacaaaggcaaggcgcacatgcataactcgaccaatgcgcaggac
gcacatgaagcgatacggccgaccagcataaacaacaccccggaggcggtaaaaccgtac
ctgaccggggaacagtacaggctgtacagcctgatttacgcccgcaccatggccagtctg
atggccgatgcgaaattcgatgtgacaagcattctgtttcaggccggaaactgcgagttt
gccgcgacaggacaggtcatgacctttgacgggtattacaaggtatatggcaaatacgaa
aaagcatccacggagctgcttccggcgctggaagaaggcgaagtctttgaaaatgtgccc
gtgatttcccgtcagcatttcacggaaccgcccgcccggtatacagaagccaggctgatc
aaggaactggaagaaaagtccatcgggcggccttccacctatgcaacgatcatcgacacg
ctgcagaaacgtggatatgccacgctggacaaagtttcggaaaccagccgcacgaaggtc
ttcactcccacggagcagggagtgctgacagaccagaaactccaggagtttttctcgaag
atcatcaacgtggaatataccgctgatatggagaagacactggatgtgattgcggaaggc
gacgaggactacatcaagttcctgcatgagttttatgatgacttcgaaccgctggtcgac
aaggcatatgaagacatgcccaagaaggaactggagcgggtgggacgcacctgcccgcag
tgcggcggagaactggtctatcgcaatggccgcttcggcaagttcatttcctgcatcaat
ttcccgaagtgccgctattccgaaacggatgaaacggatattccggaagccagggaacac
cggacctgccccaactgcggagcggatatgatcatcaagaagggccgcttcggaccattc
tgggcatgcagcaactatccggaatgcaagacaatcgtcccattgaaggagaaagccaaa
ccggagcccacaggagaaaaatgccccgaatgcggcggtgacctggtgcgccggaaatcc
cgcttcgggacctggtttgtgggctgcagcaactatcccaagtgccggtacatcaaaaag
gagccgaagaaaaaagcccctgagacactggatgcggcagaggaaaagacagaatcttcc
cggggcgaaccccatgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (54)   

Download RDF
DBGET integrated database retrieval system