KEGG   Frondihabitans sp. PAMC 28766: AX769_12960
Entry
AX769_12960       CDS       T04281                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
frp  Frondihabitans sp. PAMC 28766
Pathway
frp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:frp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AX769_12960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:frp03021]
    AX769_12960
   03400 DNA repair and recombination proteins [BR:frp03400]
    AX769_12960
Enzymes [BR:frp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AX769_12960
Transcription machinery [BR:frp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AX769_12960
DNA repair and recombination proteins [BR:frp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AX769_12960
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AMM20883
UniProt: A0A126Z0W2
Position
complement(2696118..2696384)
AA seq 88 aa
MADRNKGIIDPPIDDLLSKVESKYALVIFASKRARQINDYYADLHEGSLFDNVGPLVDST
IDDKPLSVAMHEINEDKLTSKPLEVVPE
NT seq 267 nt   +upstreamnt  +downstreamnt
atggccgacaggaacaagggcatcatcgacccgcccatcgacgacctgctctcgaaggtc
gagtcgaagtacgcgctcgtcatcttcgcatcgaagcgcgctcgccagatcaacgactac
tacgccgacctgcacgagggctcgctcttcgacaacgtcggcccgctcgtcgactccacc
atcgacgacaagccgctctccgtcgcgatgcacgagatcaacgaggacaagctcacgtcg
aagccgctcgaggtcgtccccgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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