KEGG   Francisella uliginis: F7310_02320
Entry
F7310_02320       CDS       T05017                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
frx  Francisella uliginis
Brite
KEGG Orthology (KO) [BR:frx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:frx03032]
    F7310_02320
   03400 DNA repair and recombination proteins [BR:frx03400]
    F7310_02320
Enzymes [BR:frx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     F7310_02320
DNA replication proteins [BR:frx03032]
 Prokaryotic type
  DNA Topoisomerases
   F7310_02320
DNA repair and recombination proteins [BR:frx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      F7310_02320
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4
Other DBs
NCBI-ProteinID: API86256
UniProt: A0A1L4BQZ2
Position
complement(453486..455783)
AA seq 765 aa
MAKNLVIVESPAKTKTIKKYLGSDFDILASFGHVREIPSKDTSIDVNDNFKIKFTTSDRS
KKHLDAIKKAAKTADSIYLATDPDREGEAISWHVKEVLKNARLLKDKNVYRVSFNEITKS
AVTNAIDNPKELSMDLVNAQKARQALDFLVGFNLSPLLWRKITSGLSAGRVQSPALRMIV
EREIERENFVKKDYWSLTADTFKKKKILANLIEFDNSKVEQFTFTKDQDAETAKDTILKD
ANGFLIVDGITEKKTRRNPYPPFITSTLQQEASKKLGFTAKRTMSTAQKLYEGIDLGNGE
SVGLISYMRTDSTNLSNDALNDIRSFIESKYDKDMLPAKPRVFGKKSQNAQEAHEAIRVT
AANRTPESIKQRLTADEFKLYSLIYNRTIASQMKHATLNSTSIDLITENNKHKFRVTGTV
IVDAGFLKIYNVEKDEDDKDSDDEITLPKFEKGEKIKLNDVLVKAHSTEPPPRYTEASLV
KALEKYGIGRPSTYATIISTLQQREYVEVEKRRFIPTDKGRIVNKFLTEYFKKYVEYSYT
AGLEKELDEIAHHKNDYLNVLNSFWHPFIEKINKISEDVSRKDVVTEELDEDCPECGSKL
SSRLGKNGRFIGCTNYPTCKYTRRVDSDGKEIEKEEPTIVEGRKCPECESDLHIKQGRYG
KFIGCSNYPKCKHMEPLEKPKDTGVICPKCNKNNIVEKKSRKGKVFYACSGFPKCKNAYW
YPPIKEPCPKCNSPILLHKTTKKDGEQKACPNTECDYAVPFEDSK
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggcaaaaaacttagtaattgtagagtctccagcaaaaacaaagactataaaaaaatat
ttaggaagtgactttgatatcttagcatcttttgggcatgtgcgtgaaataccatcaaaa
gatacttctatagatgtaaatgataattttaaaattaaatttacaactagcgatagaagt
aaaaaacatttagatgcgatcaaaaaagccgctaaaactgcagatagtatctatctagct
accgatccagatagagaaggtgaggcaatatcatggcatgttaaagaagttttgaaaaat
gcacgcttacttaaagataagaatgtttatagagttagctttaacgaaattacaaagtct
gctgttactaatgctatagataatcctaaagagctctctatggacttagtaaatgcacaa
aaagcacgtcaagctttagatttcttagtaggctttaacttatctccgctactatggcgt
aaaataacaagtggactatctgcaggaagagttcaaagtcccgcactaagaatgattgtt
gagcgtgaaatagaacgtgaaaattttgtcaaaaaagattactggagcctaacagctgac
accttcaaaaagaaaaaaattcttgctaatttaatagaatttgataattcaaaggttgag
caattcacattcactaaagaccaagatgcagaaactgcaaaagatactatcttaaaagat
gctaatggttttttaatcgttgatggaattactgagaagaaaaccagaagaaatccttat
cctccatttataacatccacattacaacaagaagcatctaaaaaacttggtttcactgca
aaaagaactatgtctacagctcagaaattatatgaaggtatagatctaggaaatggtgaa
tctgtaggtcttatctcatatatgaggactgactcaacaaacctttctaatgatgcttta
aatgatattagaagttttattgaatcaaaatatgataaagatatgttaccagcaaaacct
agagtttttggtaagaaatcacaaaatgctcaagaagctcacgaagctattcgtgtaact
gctgcaaacagaactcctgaatcaataaagcaacgcctaacagctgatgagtttaagctt
tatagcttaatttacaatagaactatagcttctcaaatgaagcatgcaacattaaatagc
acttctattgatttaattactgaaaataataaacataaatttagagttactggaactgtt
atcgttgatgctggattcttaaaaatctataacgttgagaaagatgaagatgacaaagac
tctgatgatgaaataactttacctaagtttgaaaaaggtgagaagataaagcttaatgat
gtactcgttaaagctcattcaacagagccacctcctcgttatacggaagcttccttagtc
aaggctttagaaaaatatggcattggccgaccatcaacatacgcaaccattatctccacg
ctacaacaaagagaatacgttgaagttgagaagcgtcgttttatccctacagataaaggc
cgtattgtaaataaattcttaacagaatactttaagaaatacgttgagtattcatatact
gctggtctagaaaaagagcttgatgaaattgctcatcataagaatgattacttaaatgtt
ttaaatagtttctggcatccttttattgagaagataaataaaatctcagaagatgtctca
cgtaaagatgttgtcacagaagagcttgatgaagactgccctgagtgtggtagtaagttg
tcttctcgtttaggtaagaatggtagatttattggttgtactaactatccaacttgtaaa
tatacccgtcgtgttgatagtgatggcaaagaaatcgaaaaagaagagcctactatagtt
gaaggtagaaaatgccctgaatgcgaatctgatttacatatcaaacaaggacgctatggt
aagtttataggttgttctaactatccaaaatgtaaacatatggagccactagaaaagcca
aaagataccggtgtaatttgtcctaaatgtaataagaataatattgttgaaaaaaaatca
cgtaaaggtaaagtcttttatgcttgttcaggattccctaaatgtaagaatgcctactgg
tatcctccaataaaagaaccctgccctaaatgtaactctccgattcttttacataagaca
actaaaaaagatggtgaacaaaaagcatgtcctaatacagaatgtgattatgctgtacct
ttcgaagatagtaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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