KEGG   Francisella uliginis: F7310_02860
Entry
F7310_02860       CDS       T05017                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
frx  Francisella uliginis
Pathway
frx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:frx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F7310_02860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:frx03021]
    F7310_02860
   03019 Messenger RNA biogenesis [BR:frx03019]
    F7310_02860
Transcription machinery [BR:frx03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     F7310_02860
Messenger RNA biogenesis [BR:frx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     F7310_02860
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT AAA ResIII Mor AAA_22
Other DBs
NCBI-ProteinID: API86357
UniProt: A0A1L4BR82
Position
complement(574821..576083)
AA seq 420 aa
MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRDNEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEVGNGSNEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVYPAISFD
RSGTRREELLTSQEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFQTMKRGAI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaatttaaatgaattaaagtataaatctgttaatgagctaatggatatagctcaaagc
ctagatcttgaatcactgcgtgcaagaaaacaagaacttatcttttcaatcttaaagtat
catgctgacaaaggcgaagatatttatggcgaaggtattttagaagttctacaggacggt
tatggtttcttaagatcttcagatagttcatattttgcatcacctgatgatatctatgtt
tcacctgcttttattaggaagctaaacctgcgtaccggtgatagcattgttggtaagatt
cgtcctccgcgtgataatgaaaaatattttgcagttaagcatatcgacagtgtcaacttt
gattctccagaattagctagaaaaaaaatcttatttgaaaacttaacccctgagtatgct
aaagaaagacttacaatggaggttggtaatggctcaaatgaagatatcacagctagagtt
attgatttagctgctccatttggtaaaggccaacgtggtttaattgttgctcctcctaaa
acaggtaaaacaattatgatgcagaatattgcaacatcaattgctaagaatcaccctgaa
tgtaacctaattatgttactaatcgatgaacgtcctgaagaggttacagaaatgcaacgt
tcagtacgtggtgaagttgtagcatcaacatttgatgaacctgcagctagacacgttcaa
ttagcagagatcgtaattgaaaaagcaaaaagattagttgagcataagcaagatgttgta
attctacttgattcaatcacaaggcttgctcgtgcatacaacacggtatctccagcttct
ggtcgtgtactatctggtggtgttgaggcaaatgctttacaaaagcctaagagattcttt
ggtgctgcgcgtaatacagctgaaggaggtagtctaacaataattgctacagctcttgta
gaaacaggatctaaaatggatgaagtcatctttgaggagtttaaaggtactggtaacatg
gagcttcaccttgatcgcaaaattgctgaacgtcgagtttatcctgctattagctttgat
agatctggtacgcgtagagaagagcttcttacatctcaagaagaattacaaaaactttgg
gttctacgtaaaattcttggtggtatggaagatgttcaagctatggaattcttaacagaa
aaaatgaaaggctctctaactaatgaagagttcttccaaactatgaaaagaggtgctatt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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