KEGG   Candidatus Protofrankia datiscae: FsymDg_0007
Entry
FsymDg_0007       CDS       T01530                                 
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
fsy  Candidatus Protofrankia datiscae
Pathway
fsy03030  DNA replication
fsy03430  Mismatch repair
fsy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FsymDg_0007
   03430 Mismatch repair
    FsymDg_0007
   03440 Homologous recombination
    FsymDg_0007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fsy03032]
    FsymDg_0007
   03400 DNA repair and recombination proteins [BR:fsy03400]
    FsymDg_0007
Enzymes [BR:fsy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FsymDg_0007
DNA replication proteins [BR:fsy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FsymDg_0007
DNA repair and recombination proteins [BR:fsy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FsymDg_0007
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AEH07600
UniProt: F8B074
Position
6082..7239
AA seq 385 aa
MKFRVERDDFTDAVAWTARTLPTRATSQLQVLAGLMLDATGPSLSVAAFDYEVAAQSGVD
ATIEQEGRALVSGKLLAEITRALPSAPVDLYTDGARVVLTCGNARFTLPTMSVDDYPALP
PMPAVTGHIEGAAFAGAVSQVAVAAGKDDTLPVLTGVRVEIDGDVLTLAATDRYRLAVRK
LRWRPASETADGVAMVPARTLSETAKSLSGSGVEVAISLGSGPSGEALAGFAGGGRQTTT
RLVDGSFPPYQRLLPDSSPLTAQVEIAPFAEAVKRVALVAARTAPVQLSFSDDQLVLEAG
AGGEAQAQETLTIGYDGPSLSIAFNPSYLLDGLGALESDVVHVGFASADDPDEASKKPAI
LTGKAPDDGEVPDYRYLLMPIRLSG
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaagttccgggttgaacgggacgacttcaccgatgccgtggcatggacggcgcgcaca
ctgccgacccgggcgacctcccagcttcaggtcctggccggcctcatgctggacgccacc
gggccgtcgctgtcggtcgcggccttcgactacgaggtggccgcccagtccggtgtggac
gcgacgatcgagcaggagggccgggccctggtctccggcaagctgctcgccgagatcacc
agggccctcccgtccgcgccggtcgacctgtacaccgacggcgcgcgggtggtcctcacc
tgtggcaacgcgcgtttcaccctgccgaccatgtcggtggacgactacccggcgctgccg
ccgatgccggcggtcaccggccacatcgagggcgcggcgttcgccggggccgtctcgcag
gtcgccgtcgccgccggcaaggacgacaccctgcccgtcctcaccggtgtgcgggtcgag
atcgacggcgatgtcctcaccctggccgctaccgaccgctaccggctggcggtccggaag
ctgcgatggcgcccggcgtccgagacggccgacggcgtggccatggtgccggcacgtaca
ctgagcgagacggcgaagtctctgtccggatccggtgtggaggtcgcgatctccctcggc
tcgggtccctccggggaggcgctggccgggttcgccggtggcggccgtcagaccacgacc
cgcctggtggacggctcgttcccgccctaccagcggctgctgcccgacagctcaccgctg
accgcccaggtcgagatcgccccgttcgccgaggctgtcaagcgtgtcgcgctggtcgcc
gcccgcaccgccccggtccagttgagcttctccgacgatcaactggttctggaggccggg
gccggcggtgaggcccaggcccaggagacgttgacgatcggctacgacggaccgtcgctg
tcgatcgccttcaacccgtcgtacctgctcgacggcctgggtgcgctggagtccgatgtc
gtccacgtcgggttcgccagcgctgatgacccggacgaggcgtccaagaagcccgccatc
ctcaccggcaaggcgcccgacgacggtgaggtcccggactaccggtacctgctcatgccg
atccggctgtccgggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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