KEGG   Candidatus Protofrankia datiscae: FsymDg_4444
Entry
FsymDg_4444       CDS       T01530                                 
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
fsy  Candidatus Protofrankia datiscae
Pathway
fsy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FsymDg_4444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fsy03019]
    FsymDg_4444
   03110 Chaperones and folding catalysts [BR:fsy03110]
    FsymDg_4444
   03029 Mitochondrial biogenesis [BR:fsy03029]
    FsymDg_4444
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fsy04147]
    FsymDg_4444
Enzymes [BR:fsy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     FsymDg_4444
Messenger RNA biogenesis [BR:fsy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FsymDg_4444
Chaperones and folding catalysts [BR:fsy03110]
 Heat shock proteins
  HSP60 / Chaperonin
   FsymDg_4444
Mitochondrial biogenesis [BR:fsy03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    FsymDg_4444
Exosome [BR:fsy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   FsymDg_4444
  Exosomal proteins of other body fluids (saliva and urine)
   FsymDg_4444
  Exosomal proteins of breast cancer cells
   FsymDg_4444
  Exosomal proteins of colorectal cancer cells
   FsymDg_4444
  Exosomal proteins of bladder cancer cells
   FsymDg_4444
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AEH11693
UniProt: F8AZF4
Position
5189297..5190919
AA seq 540 aa
MPKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGVPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTNDVAGDGTTTATILAQALVREGLRNVAAGANPLGLKKGIE
VAVERVSEELSKQAKEVETKEQIASTASISAGDPAIGALIAEALDKVGKEGVVTVEESNT
FGLELELTEGMRFDKGYISPYFVTDADRQEAVLDDPYILIVNSKISAVKDLLPLLEKVMQ
AGKSLAIIAEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKALLGDIAILTGGQVIS
EDVGLKLESTTLDLLGKARKFVVTKDETTIVEGAGDPDQIAGRVSQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKEKKHRIEDAVSNAKAAVEEGIVAGGGVALLQA
SVTAFEKLDLAGDEATGANIVRLALEAPIKQIAYNSGLEGGVVVDKVRHLPAGHGLNAAT
GEYVDLIGTGIIDPAKVTRSALQNAASIAGLFLTTEAVIADKPEKNPAPAAPGGGGDLDF
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgccgaagatcattgccttcgatgaggaggcacggcgcggcctggagcgcggcatgaac
cagttggccgacgccgtgaaggtcacactcggcccgaagggccgcaacgtcgttctggag
aagaagtggggcgtccccacgatcaccaacgacggcgtgagcatcgccaaggagatcgaa
ctcgaggacccgtacgagaagatcggcgcggaactcgtcaaggaagtagcgaagaagacc
aacgacgtcgcgggtgacggcaccaccaccgcgacgatcctcgcccaggcactggtccgc
gagggtctgcgcaacgtggcggccggcgccaacccgctgggcctgaagaagggcatcgag
gtcgcggtcgagcgcgtctccgaggagctctccaagcaggccaaggaggtcgagaccaag
gagcagatcgcctccacggcgtccatctccgcgggcgaccccgcgatcggcgcgctgatt
gccgaggcgctggacaaggtcggcaaggagggtgtcgtcaccgtcgaggagagcaacacc
ttcggcctcgagcttgagctcaccgagggtatgcgcttcgacaagggctacatctcgccg
tacttcgtcaccgacgccgaccgtcaggaagccgtcctcgacgacccgtacatcctcatc
gtcaacagcaagatctcggcggtcaaggacctgctcccgctcctggagaaggtcatgcag
gccggcaagtcgctggcgatcatcgctgaggacgtcgagggcgaggccctggccaccctg
gtcgtcaacaagatccgtggcaccttcaagagcgtcgcggtgaaggcccccggcttcggt
gaccgccgcaaggctctgctcggtgacatcgccatcctcaccggcggccaggtcatctcc
gaggacgtcggcctgaagctggagagcaccaccctcgacctgctcggcaaggcccgcaag
ttcgtcgtcaccaaggacgagaccacgatcgtcgagggcgccggcgaccccgaccagatc
gccggtcgagtcagccagatccgcgccgagatcgagaagtcggactccgactacgaccgc
gagaagctgcaggagcggctggccaagctcgccggtggtgtcgcggtcatcaaggtcggt
gccgccaccgaggtcgagctcaaggagaagaagcaccgcatcgaggacgccgtctcgaac
gcgaaggccgcggtcgaggagggcatcgtcgccggtggtggcgtcgcgctgctgcaggcg
tcggtcaccgccttcgagaagctcgacctcgccggtgacgaggccaccggggcgaacatc
gtccgcctcgccctggaggcgccgatcaagcagatcgcctacaacagcggccttgagggc
ggcgtcgtggtcgacaaggtccgccacctgcccgccggccacggcctgaacgcggccacc
ggcgagtacgtcgacctgatcggcaccggcatcatcgacccggccaaggtcacccgttcg
gcgctgcagaacgccgcgtcgatcgccgggctgttcctcaccaccgaagccgtcatcgcc
gacaagccggagaagaacccggccccggccgcgcccggcggcggtggagacctcgacttc
tga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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