KEGG   Francisella tularensis subsp. holarctica OSU18: FTH_1683
Entry
FTH_1683          CDS       T00399                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
fth  Francisella tularensis subsp. holarctica OSU18
Pathway
fth03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fth00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FTH_1683 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fth03021]
    FTH_1683 (rpoB)
   03400 DNA repair and recombination proteins [BR:fth03400]
    FTH_1683 (rpoB)
Enzymes [BR:fth01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FTH_1683 (rpoB)
Transcription machinery [BR:fth03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FTH_1683 (rpoB)
DNA repair and recombination proteins [BR:fth03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FTH_1683 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7
Other DBs
NCBI-ProteinID: ABI83459
UniProt: Q0BKC5
Position
complement(1676846..1680922)
AA seq 1358 aa
MSYSYAEKKRIRKEFGVLPHILDVPYLLSIQTESYKKFLTVDAAKGRLHSGLEIVLKQSF
PVESKNGQYELHYVDYQIGEPTFDETECQVRGATYDAPLNVKLRLVVYNKDALPNEKIVE
DIREEYVYMGDIPLMTTNGTFIINGTERVVVSQLHRSPGVFFSKDDSEEGAFSARIIPYR
GSWLDFEFDSKGIIWARIDRKRKFCATVILKALGYTQEQILENFSESKTITFNSKGFALR
LDNLSNMKGELLKFDIVDAQDNVIVKKNKKLTSRDVKKIKDAGVDSVAIDFDLVSTLRVA
KDIVNEATGEVIAYANDDVTESLLESCVEVGMLELEVIDFITTERGRYISDTLKYDLTRN
TDEALVEIYKVLRPGDPPAAASVKALFEGLFFIESRYSLSDIGRMKLNARLGSDKVSKDI
YTLENSDIVGVIEELINIRDGKGKVDDIDHLGNRRVRSVGEMVENQFRIGLYRVEKGIRE
SMSLVHKDKLMPKDIVNSKPITAAIKEFFTSGALSQFMDQDNPLSEVTHKRRISALGPGG
LSRDRAGFEVRDVHATHYGRLCPIETPEGPNIGLINSLASYARVNDYGFLEAPYRKVVDG
KVTDEIEYLSAIDEDNYVIAQASTKLDENNHFVEDIIQCRSGGEAIFTESSRVQYMDVSA
KQMVSAAAALIPFLEHDDANRVLMGANMQRQAVPTLKSEKPLVGTGMEKIVARDSGNCII
ARNVGEVAEVDSNRIVIKVDTEKSQTSNLVDIYSLTKFKRSNKNTCINQRPIVNVGDKVE
AGDILADGFATDFGELSLGHNLMVAFMPWNGYNFEDSILLSERIVKDDKYTSIHIEEFTC
VARDTKLGPEEITADIPNVSESSLAKLDESGIVHIGANVEAGDILVAKITPKAEQQLTPE
ERLLRAIFNEKASNVVDSSLRMPSGTSGTVINVQVFENDKGGKSKRALKIEKELIDKARK
DFDEEFAVIESVVKSSIEQEVVGAKIQKAKGLKKGAILTKEFLATLPLSKWLEISFEDEK
LEEKVQNAREYYEEAKIAIDAKFEAKKKSITQSNELSPGVLKTVKVFVAIKKRIQPGDKM
AGRHGNKGVVSRVLPVEDMPYMEDGTPVDVCLNPLGIPSRMNIGQILEAHLGLASYGLGK
KIEKTLEKTRKAAELRKTLEEVYNSVGDKKVNLEALNDEEILTLCDNLKGGVPIATPVFD
GAKEEDIKSLLKIGGFATNGQMKLFDGRTGKPFDRHVTVGYMYMLKLDHLVDDKMHARST
GSYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLREMLTVKSDDIAGRSKMYKNI
VDGKLTMNVDVPESFNVLRNEVRALGIDMDFDYSSEEE
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgtcttactcatacgctgagaaaaaaagaattcgtaaagagtttggggttcttcctcat
atcttagatgtaccatatttgctttctattcaaacagagtcatacaaaaaattcttgact
gtagatgcagcaaaaggaagacttcactctggacttgaaatagttttaaaacagtctttt
cctgttgagagtaaaaatggtcaatatgaacttcactatgttgattatcaaattggtgag
cctacttttgatgaaactgaatgtcaggttcgtggtgctacttatgatgcaccattaaat
gtgaagttaagattagttgtatataataaagatgctcttccaaatgagaaaattgtcgag
gacattagagaagagtatgtgtacatgggcgatattccgctaatgacaactaatggtact
tttatcattaatgggacagaaagagtagtagtctctcagttgcatagatcaccaggggtg
ttctttagtaaggatgactctgaggaaggagcattctcagcacgtattatcccatataga
ggctcatggcttgattttgaatttgactcaaaaggtattatatgggctaggattgataga
aaaagaaaattctgtgctacagttattttaaaagctcttggttatactcaagagcaaata
ttagagaatttttctgagagtaagactattacttttaatagtaaaggttttgctcttaga
cttgataacctttcaaatatgaaaggtgagctgcttaagtttgacattgtagatgctcaa
gataatgttattgttaaaaagaataaaaaattaacttcaagagatgttaagaaaattaaa
gatgcaggcgttgactctgtagctattgattttgatttggtcagcactcttagagttgca
aaagatatcgttaatgaagcaacaggtgaagtgatagcttatgctaatgacgatgttaca
gaaagtttattagagtcatgcgtagaagttggcatgcttgaattagaagttattgatttt
ataactactgaaagaggtaggtatatatctgatactttaaaatatgatcttacaagaaat
actgatgaggcacttgtcgagatatataaggtattacgaccaggtgatcctcctgcagca
gcttcagttaaagcattatttgaaggtttattctttattgaaagtagatatagcctttct
gatattggtagaatgaagctaaatgctagattaggttcggataaggtatctaaagatatc
tatactttagaaaatagtgatatagttggcgtaattgaagagcttataaatatccgtgat
ggtaaaggtaaagttgatgatattgatcatttaggtaacagacgtgtacgttctgttggc
gagatggttgagaatcagtttagaataggcctctaccgtgtagagaaaggtattcgtgaa
agtatgtctttagtacataaagataagcttatgccaaaagatatcgttaactcgaagcca
atcacagcagcaattaaagaattctttacttctggagcgttatcacaatttatggatcaa
gataacccattgtcagaagttacacataagcgtagaatatctgcattaggtccaggtggt
ttatcacgtgatagagcaggttttgaagtacgtgatgttcatgcaacacactatggtaga
ttatgtccaattgagactccagaaggtccaaatattggtctaattaactcattagcaagt
tatgctcgtgttaatgattatggtttcttagaagcaccatatcgaaaagttgttgatggt
aaggttacagatgaaattgaatacttatctgctatcgatgaagataattatgtaattgct
caagcatcaactaaacttgatgaaaataaccattttgttgaagatattattcaatgtcgt
tctggaggtgaggcaatatttactgagtcaagtagagttcagtatatggatgtttctgct
aaacagatggtttcagcagctgcggcactaattcctttccttgagcatgatgatgctaac
agggtattgatgggtgcaaacatgcaacgtcaagcggtaccgactcttaaatctgagaag
cctttagtcggtacaggtatggagaagattgttgctagagattctggtaattgtattatc
gcaagaaatgttggtgaagtggctgaagttgattctaacagaatcgttattaaagtagat
actgaaaaatcacaaactagtaatttggttgatatttatagtttaactaaatttaaacgc
tcaaacaaaaatacttgtattaaccagcgtccaatagtaaatgtgggtgataaagtagaa
gctggtgatattttagcggatggttttgcaactgattttggtgaattgtcactagggcat
aacttgatggttgcttttatgccatggaatggttataactttgaggattcgatcttacta
tctgaaagaatagtaaaagatgataagtatactagtatccatattgaagagttcacatgt
gtggctcgtgatactaagcttggtcctgaagagataactgcagatattccaaatgttagt
gagtctagtttggcaaaacttgatgaatcaggtatcgtccatattggcgctaatgtcgaa
gcaggcgatattttggtagctaagattactccaaaagctgagcaacaactaactcctgaa
gagagactacttagagcaatctttaatgaaaaagcatcaaatgttgttgatagttcatta
agaatgccaagtggtacttctggtacggttattaatgttcaagtatttgagaatgacaaa
ggtggtaaaagtaagcgagctcttaagattgaaaaagaactgatcgataaagctcgtaag
gattttgatgaggagtttgcagtaattgaatctgtagttaaatcatcaattgagcaagaa
gttgttggtgcaaaaatccaaaaagcaaaaggtcttaaaaaaggtgctatccttacaaaa
gaatttttagcaacactacctttatctaaatggctagaaatttcttttgaggatgagaaa
cttgaagagaaagttcaaaacgctagagagtattatgaggaagctaaaattgctatagat
gctaaatttgaagctaagaaaaaatctattactcagagtaatgagctatctccaggtgtg
cttaagactgttaaagtttttgttgcgattaaaaagcgtatccagccaggtgataagatg
gctggtcgtcatggtaacaaaggtgtggtttcacgcgtattaccagttgaagatatgcca
tatatggaagatggtactcctgtagacgtttgtctaaatcctttaggtatcccatcacgt
atgaacattgggcagattttagaagcacacttaggattggcttcatatggtttaggtaaa
aaaatcgaaaaaactttagagaaaactagaaaagcagctgaactaagaaagactttagaa
gaagtatataatagcgttggcgataagaaagttaatcttgaggctttaaatgacgaagag
atactaactctttgtgacaacctaaaaggtggagtaccaatcgctacaccagtatttgat
ggtgctaaagaagaagatattaaatcactactgaaaataggcggctttgcaactaatggt
cagatgaagctttttgatggtcgtactggtaagccttttgatagacatgtaactgttggt
tatatgtatatgctaaaactagatcacttagtagatgataagatgcatgcaagatcgact
ggctcatatagtctagttacgcagcaaccattaggtggtaaagcacagtttggtggacaa
agattcggtgagatggaagtttgggcattacaagcatatggtgctgcttatacattaaga
gagatgctaacagttaagtcagatgacatagcaggtagatctaaaatgtataagaatata
gttgatggtaagttgactatgaatgtagatgttccagaatcattcaatgttttaagaaat
gaagttagagcattgggtatagatatggattttgactattcatctgaggaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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