KEGG   Francisella tularensis subsp. novicida U112: AW25_1602
Entry
AW25_1602         CDS       T03874                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
ftx  Francisella tularensis subsp. novicida U112
Brite
KEGG Orthology (KO) [BR:ftx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ftx03032]
    AW25_1602 (topA)
   03400 DNA repair and recombination proteins [BR:ftx03400]
    AW25_1602 (topA)
Enzymes [BR:ftx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AW25_1602 (topA)
DNA replication proteins [BR:ftx03032]
 Prokaryotic type
  DNA Topoisomerases
   AW25_1602 (topA)
DNA repair and recombination proteins [BR:ftx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AW25_1602 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 Asr
Other DBs
NCBI-ProteinID: AJI61246
UniProt: A0Q520
Position
1698765..1701059
AA seq 764 aa
MAKNLVIVESPAKTKTIKKYLGNEFEILASFGHVREIPSKDTSIDVNDNFKIKFTTSEKS
KKHLDAIKKAAKDAQNIYLATDPDREGEAISWHVQEVLKSARLLKDKNIYRVTFNEITKS
AVTNAIANPKELSMDLVDAQKARQALDFLVGFNLSPLLWRKITSGLSAGRVQSPALRMIV
EREIERENFVKQDYWSLTADTFKQKQIFANLLEFNNNKVEQFTFTTAEDAENAKAHILKD
ANGFLIVDGITEKKTRRNPYPPFITSTLQQEASKKLGFTAKRTMSTAQKLYEGIDLGNGE
SVGLISYMRTDSTNLSNDALNDIRNFIQAKYDKDMLPAKPRVFEKKSQNAQEAHEAIRVT
AANRTPESIKQFLTNDEFKLYSLIYNRTIACQMKHATLNSTSVDLITENTKHRFRVTGTV
IVDAGFLKIYNVEKDEDEKDSDDEQTLPKFEKGEKIILNDVITKAHSTEPPPRYTEASLV
KALEKYGIGRPSTYATIISTLQQREYVEVDKRRFIPTDKGRIVNKFLTEYFKKYVEYSYT
AGLEKELDEIAHHKNDYLSVLNNFWHPFIERINKISEDVSRKDVVQEELEEDCPECGSKL
SLRLGKNGRFIGCTNYPTCKYTRPVDSDPKEVIKEEPIVVEDRKCPKCNSDLHIKQGRYG
KFIGCSNYPECKHMEPLEKPKDTGVVCPKCNKNHIVEKKSRKGKVFYACAGFPKCKNAYW
YPPIKEECPKCHSPILLHKITKKDGEQKACPNSECDYAVPFETK
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggcaaaaaatttagtaatcgtagagtctccagccaaaactaagactataaaaaaatac
cttggtaacgaatttgaaatattagcatcattcggacacgtacgcgaaataccttccaaa
gatacttctatcgatgttaatgataattttaagattaagttcacaactagtgaaaaaagc
aaaaaacatttagatgcaatcaaaaaagcagctaaagatgctcaaaatatctatctcgct
actgacccagatagagaaggtgaagctatatcatggcatgtacaagaagtattaaaaagt
gcacgcttacttaaagataaaaatatctatcgtgtcacatttaacgaaatcacaaaatca
gcagttacaaatgctatagcaaatccaaaagagttatctatggatttagttgatgctcaa
aaagcacgccaagcactagattttcttgttggctttaatctatctccgctattatggcgt
aaaatcaccagtggcttatccgcaggtagagtacaaagtcctgctctaagaatgattgtc
gagcgtgaaatagagcgtgaaaactttgtcaaacaagattattggagtctaactgcagat
actttcaaacaaaaacaaatatttgcaaatttgcttgaatttaataataataaagttgaa
caattcactttcacaacagcagaagatgctgaaaatgcaaaagcccatatcctaaaagat
gctaatggttttttgatagttgatggcattactgagaaaaaaacacggagaaacccatat
cctccatttataacatcaacactacagcaagaggcttcaaaaaaactcggctttaccgct
aaaaggacaatgtctactgcacaaaaattatatgaaggtattgatctaggcaatggtgaa
tccgttggtcttatctcgtacatgagaacagattcaaccaacctttctaacgatgctctt
aatgatattagaaactttattcaagcaaaatatgataaggatatgctaccagctaagcca
cgagtttttgagaaaaaatcacagaatgcgcaagaggcacacgaagctatccgtgtcaca
gctgcgaatagaactccagaatcaataaagcagtttttaactaatgatgaatttaagctc
tatagcctaatctacaatcgaactattgcttgtcaaatgaaacatgcaactttaaatagt
acatctgtagatttaattaccgaaaatactaaacataggtttagagttacaggaactgtt
atagtagatgccggattcttgaaaatttataatgttgagaaagatgaggatgaaaaagac
tccgatgatgagcaaactttaccaaaatttgaaaaaggtgaaaaaataatactaaatgat
gtaattactaaagcccactcaacagagccaccacctcgctataccgaagcatctttggtt
aaagcattagaaaaatatggtattggtagaccttcaacctatgcaacaatcatctcaact
ttacagcaacgtgagtatgttgaggtagataaacgtcgttttatccctacagataaaggt
cgtatcgtaaataaatttctaactgaatatttcaaaaaatatgttgagtactcttatacc
gcaggcttagaaaaagagcttgatgaaattgctcatcacaaaaatgattacctaagtgta
ttaaataatttctggcatccatttattgagagaatcaataagatttctgaagatgtctca
cgcaaagatgttgtgcaagaagagctagaggaagactgtcctgaatgcggtagtaaatta
tcacttcgacttggtaaaaatggtagatttattggctgtacaaactacccaacttgtaaa
tacacccgtccagtagatagtgatcctaaagaagtcatcaaagaagaacctatagtcgta
gaagatagaaaatgccctaagtgtaattctgatttgcatatcaaacaaggtcgctatggt
aagtttattggttgctcaaattatcctgaatgcaaacatatggaacctcttgaaaaaccc
aaagatactggtgtagtttgtcctaaatgtaataaaaatcatattgttgagaaaaaatct
cgcaaaggtaaagttttctatgcttgtgctggcttccctaagtgtaaaaatgcttattgg
tatccaccaataaaggaagagtgtcctaaatgccactcaccaatactgttacacaagata
accaaaaaagatggcgaacagaaagcttgccctaatagcgagtgtgactatgctgtacca
tttgaaactaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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