KEGG   Fusobacterium animalis 4_8: HMPREF0409_01228
Entry
HMPREF0409_01228  CDS       T02680                                 
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
fus  Fusobacterium animalis 4_8
Pathway
fus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HMPREF0409_01228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fus03400]
    HMPREF0409_01228
DNA repair and recombination proteins [BR:fus03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HMPREF0409_01228
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HMPREF0409_01228
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 Kinesin AAA_30 UB2H
Other DBs
NCBI-ProteinID: AGM22966
UniProt: R9R906
Position
534591..536582
AA seq 663 aa
MENNLFKIHSEYRPTGDQPTAIDSIVKNIENGIKDQVLLGVTGSGKTFTIANVIERVQRP
SLIIAPNKTLAAQLYSEYKKFFPENAVEYFVSYYDYYQPEAYIKTTDTYIEKDSSVNDEI
DKLRNAATAALIHRRDVIIVASVSSIYGLGSPDTYRKMTIPIDKQTGISRKELIKRLVDL
RYNRNDVAFERGQFRIKGDVIDIYPSYMSNGYRLEYWGDDLEEISEINTLTGQKVKKNLE
RIVIYPATQYLTADDDKDRIIKEIKDDLKVEVKKFEDEKKLLEAQRLKQRTEYDLEMITE
IGYCKGIENYSRYLAGKNPGETPDTLFEYFPKDFLLFIDESHITVPQIRGMYNGDRARKE
SLVENGFRLKAALDNRPLRFEEFREKSNQTVFISATPGDFELEVSDNHIAEQLIRPTGIV
DPEIEIRPTKNQVDDLLDEIRKRAAKKERVLVTTLTKKIAEELTEYYIELGVKVKYMHSD
IDTLERIEIIRALRKGEIDVIIGINLLREGLDIPEVSLVAIMEADKEGFLRSRRSLVQTI
GRAARNVEGRVILYADIMTDSMKEAITETERRRKIQKEYNAYNHIDPKSIVKEIAEDLIN
LDYGIEEKKFENNKKVFRNKADIEKEITKLEKKIKKLVEELDFEQAIILRDEMLKLKELL
LEF
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggaaaataatttatttaaaatacattcagaatatagaccaactggggatcaacctact
gcaatagatagtatagtaaaaaatatagaaaatgggattaaagaccaggttttattggga
gtaacaggctctggaaaaacatttacaatagccaatgttattgaaagagtgcaaagacct
tctttaataattgcaccaaataagactttggcagcacaactttattcagagtataaaaag
ttctttccagaaaatgcagtggaatactttgtttcatattatgattattatcaaccagaa
gcctatataaaaacaactgacacttatatagaaaaagattcatcagtaaatgatgaaatt
gataaacttcgtaatgcagcaacagcagctttgatacacaggagagatgttattattgtt
gcctctgtatcatctatttatggattaggatctcctgatacatatagaaaaatgactatt
ccaatagataaacagactggaatttcaagaaaagaattgataaaaagattagttgattta
agatacaatagaaatgatgtagcttttgaaagagggcaattcagaataaagggagatgta
atagatatctatccatcgtatatgagtaatggatataggttagaatattggggagatgat
ttagaagaaatttctgaaataaatactttaacagggcaaaaagttaaaaagaatttggaa
agaatagttatttatcctgcaactcaatatttaacagcagatgatgataaggatagaatt
ataaaagaaataaaagatgatttaaaagttgaagtgaaaaagtttgaagatgaaaaaaaa
ttattggaagcacaaagattgaagcaaagaacagaatatgatttagaaatgataactgaa
attggttattgtaagggaatagaaaactattcaagatacttagctggaaaaaatccagga
gaaacaccagatactttatttgaatattttccaaaagattttttattgttcatagatgaa
tctcacattactgtaccacaaataagaggaatgtacaatggagatagagcaagaaaagaa
tctttggttgaaaatggttttagactaaaagctgccttagataatagacctttaagattt
gaagaatttagagaaaaatcaaatcaaacagtttttatttcagcaacaccaggagacttt
gaacttgaagtttcagataatcatatagccgaacaacttataagacctacaggtatagtt
gatccagaaattgaaataagacctactaaaaatcaagttgatgatttattagatgaaatt
agaaaaagagcagctaaaaaagaaagagttttggttacaactcttacaaaaaagatagca
gaggaattgacagaatattatattgaactaggtgtgaaagtaaaatatatgcactctgat
attgatactttggaaagaattgaaataataagagctttaagaaaaggtgaaattgatgtt
ataataggaattaatcttttaagagaaggattagatattccagaagtttcattagtagct
attatggaagcagataaagaaggttttttaagaagtagaaggtctttggttcaaacaata
gggagagctgctagaaatgttgaaggtagagtaatcctatatgcagatattatgacagat
tctatgaaagaagctataacagaaactgaaagaagaagaaagattcaaaaggaatataat
gcctataatcatatagatcctaaatctattgttaaagagatagcagaggatttaatcaat
ttagattatggtattgaagaaaagaaatttgaaaataataaaaaagtatttagaaataag
gcagatattgaaaaagaaataactaaactagaaaagaaaattaagaaacttgttgaagaa
ctagattttgaacaggcaataattttaagagatgagatgttaaagttaaaagaattatta
ttagaattttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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