KEGG   Fusobacterium varium: FV113G1_04430
Entry
FV113G1_04430     CDS       T05280                                 
Name
(GenBank) putative exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fva  Fusobacterium varium
Pathway
fva03030  DNA replication
fva03430  Mismatch repair
fva03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FV113G1_04430
   03430 Mismatch repair
    FV113G1_04430
   03440 Homologous recombination
    FV113G1_04430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fva03032]
    FV113G1_04430
   03400 DNA repair and recombination proteins [BR:fva03400]
    FV113G1_04430
Enzymes [BR:fva01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FV113G1_04430
DNA replication proteins [BR:fva03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FV113G1_04430
DNA repair and recombination proteins [BR:fva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FV113G1_04430
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 Peptidase_M23_N Syntaxin-18_N Transposase_32
Other DBs
NCBI-ProteinID: BBA50096
Position
complement(505310..505870)
AA seq 186 aa
MKILFIDTETGGITEKSALIQLSGIVQIGKEVAEEFDFYIKPFPGSEVTDEALRIQGRTR
EEVEQYNSEEEIFKKFMHILNKYIDKYNKEDKFLVGGYNVRFDIDVLNRFLRRHGEKYLF
SYIQSTTLDPLQWIAALQLLKKVPVLKDNKLETWCNHFGIELKAHDSLEDIKATKALTKK
MMLLMK
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaagatactttttatagatactgaaactgggggaataactgaaaaatctgcacttatt
cagctttcaggaattgttcaaattggaaaagaagtcgctgaggaatttgatttttatata
aaaccatttccaggatcagaagttacagatgaagctctcagaattcaaggcagaactaga
gaagaagttgaacaatataattctgaagaagaaatctttaaaaaattcatgcatatttta
aacaaatatattgataaatataataaagaagataaatttcttgtaggtggctataatgta
agatttgatatagatgttttgaatagatttttacgaagacatggagaaaaatatcttttc
agctatattcagtcaacaacattagatcctttacaatggattgcagcattacagcttcta
aaaaaagttcctgtacttaaagataataaacttgaaacatggtgtaatcattttggaata
gaattaaaagctcatgattccttagaagatattaaggcaactaaagctcttacaaaaaaa
atgatgctgttaatgaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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