KEGG T02666: 101292999

Fragaria vesca (woodland strawberry): 101292999

Entry

101292999         CDS       T02666

Name

(RefSeq) homeobox-leucine zipper protein HDG11

K09338

homeobox-leucine zipper protein

Organism

fve Fragaria vesca (woodland strawberry)

Brite

KEGG Orthology (KO) [BR:fve00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:fve03000]
    101292999
Transcription factors [BR:fve03000]
Eukaryotic type
  Helix-turn-helix
   Homeo domain other
    101292999

SSDB

Motif

Pfam:

START Homeodomain Homeobox_KN

Other DBs

NCBI-GeneID:

101292999

NCBI-ProteinID:

XP_004299483

Position

LG5:complement(9597994..9601328)

AA seq 709 aa
MEFGGGSGGDHDGSDSHRRKKRYHRHTSNQIQRLEAMFKDCPHPDEKQRLQLSRELGLAP
RQIKFWFQNRRTQMKAQHERADNSVLRSENDKIRCENIAIREALKNVICPSCGVPPINED
NYFDEHKLRMENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASFGGHGM
GGPSLDLDLLPGSTSSTMPSLPYQPIGISDMDKSLMTDIAANAMEELLRLLQTNDPLWMK
SSTDGKDVLNLESYDRIFPRATTHLKNPNLRIEASRASGVVIMNGLALVDMIMDPNKFGE
LFPTIVSMARTIEVISSGMLGSHSGTLQLMYKELQLLSPLVPTREFYFLRYCHQIEQGHW
AIVDVSYDFPRDNQFANQSRSHRLPSGCLIQDMPNGYSKVTWVEHVEIEEKAPIHRLYRD
LIHSGQAFGAERWLVALQRMCERYACLMVSGTSTRDLEGVIPSPEGKRSMMKLAQRMVNN
FCASISTSNGHRWTTISGMNEVGVRVTIHKSTDPGQPNGVVLSAATTIWLPLSPQTVFNF
FKDERTRPQWDVLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCIDSSG
SLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTITPDGRQDQGDTSASTSSCSNINHIGG
SGSLITVAFQILVSSLPSAKLNMESVNTVNNLIGTTVQQIKSALNCSSS

NT seq 2130 nt +upstreamnt +downstreamnt
atggagtttggcggtggctccggtggagaccacgatggctcagactctcatagaaggaag
aagcgctaccatcgtcacacttctaaccagattcagaggcttgaagcgatgttcaaagac
tgccctcacccggatgaaaagcaaaggttgcagttgagcagagaactgggcttggctcct
cgccagatcaaattttggttccaaaaccggagaacccagatgaaggcccaacatgaaaga
gctgataactctgtgcttcgatcagagaacgacaagatccgatgtgagaacattgccatc
cgagaggcactcaaaaatgtgatttgcccatcttgtggtgtccctcccattaatgaagat
aattattttgatgaacacaaattgagaatggagaacgctcagttgaaagaagagctagat
agagtatctagtattgctgccaagtacatagggaggcccatttctcagctcccaccagtt
cagcctattcatatatcttctctggatttatcaatggcaagttttggggggcatggcatg
ggtggtccttctcttgatcttgatcttcttccggggagtacttcatctacaatgcctagt
ttgccttaccagccgattggcatttcggacatggacaagtccctcatgacagatattgct
gcaaatgcaatggaagagttgcttaggcttttgcagactaatgatccactatggatgaag
tcatccaccgatggcaaggatgttcttaatcttgaaagctatgataggattttccccagg
gctactactcatttgaaaaatcccaatcttagaattgaagcatctagagcttctggtgtg
gtaatcatgaatggcttagcattagtcgacatgattatggacccgaacaaatttggggaa
ctatttccgacaattgtatcaatggctagaacaattgaagtgatatcgtctggaatgtta
ggtagtcacagtggcactctgcagctgatgtacaaagagttgcagctgctttctccatta
gtaccaactcgagagttctacttccttcgttattgtcatcaaattgagcaaggccattgg
gcaattgttgatgtttcttatgattttccacgagataaccagtttgcaaatcaatctcga
tctcataggcttccttctggatgcttgattcaagacatgcctaatggatattccaaggtt
acttgggtggaacatgttgaaatagaagagaaagccccaattcatcgactttatagagat
ctaattcacagtggacaagcatttggagctgaacgttggcttgttgctcttcagagaatg
tgcgaaagatatgcatgcctaatggtttcaggcacttctactagagatcttgaaggagtg
atcccgtcacctgaaggcaagagaagcatgatgaaacttgcccaaaggatggtcaacaac
ttctgtgcaagcattagcacatctaatggccatcggtggaccacaatttctggtatgaac
gaggttggagtgcgagtaaccatccataagagcacggatcctggtcaacccaatggtgtg
gttcttagtgcagctactaccatttggctcccactatctccacaaactgtcttcaatttc
ttcaaggatgaaagaactcgacctcagtgggatgtcctttccaatggcaatgcagtgcaa
gaagttgcccatatagcaaatggttctcatccagggaactgcatatctgttcttcgagcc
ttcaacactagccagaacaacatgttgatactccaggagagttgcatagactcatcaggg
tctctagttgtgtactgccccgttgatcttccagccatcaacatcgcaatgagcggcgag
gatccttcatacattcctctgctgccatcaggattcaccattacacctgatgggcggcaa
gaccaaggggacacatctgcatcgacaagtagttgttctaacataaaccacataggaggc
agtggctcactgattacagtggcatttcaaattcttgtgagcagcttgccctcggcaaag
ttgaacatggagtcggtgaatacagtgaacaaccttattggcaccaccgtgcagcaaata
aagtctgccttgaattgtagtagttcctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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