KEGG   Fragaria vesca (woodland strawberry): 101293290
Entry
101293290         CDS       T02666                                 
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101293290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101293290
   03110 Chaperones and folding catalysts [BR:fve03110]
    101293290
   03029 Mitochondrial biogenesis [BR:fve03029]
    101293290
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fve04147]
    101293290
Enzymes [BR:fve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     101293290
Messenger RNA biogenesis [BR:fve03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     101293290
Chaperones and folding catalysts [BR:fve03110]
 Heat shock proteins
  HSP60 / Chaperonin
   101293290
Mitochondrial biogenesis [BR:fve03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    101293290
Exosome [BR:fve04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101293290
  Exosomal proteins of other body fluids (saliva and urine)
   101293290
  Exosomal proteins of breast cancer cells
   101293290
  Exosomal proteins of colorectal cancer cells
   101293290
  Exosomal proteins of bladder cancer cells
   101293290
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 101293290
NCBI-ProteinID: XP_004297181
Position
LG4:complement(16720116..16723982)
AA seq 616 aa
MAFSPTPISALSSTNPTLPKRPSSPFTTANPKGIPKDLYFNHDGSATKKLLAGVSMVAEL
VGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDSVENVGVKLVRQAGAKTNDLAG
DGSTTAVILAHGLITEGVKVTAAGMNPIQIARGIEKTAVALVSELKLMSREIEDHELADV
AAVSAGNDYTVGNMIYSALCQVGKKGVVSIEKGKSTENTLQVVEGMQFDRGYLSPYFVTD
RQKMIVEFQECKLLLVDKIITHPEELFKILDNAVKEKYAIVIVAEGIEQEALTPVIRNKL
RGALKAVAIKAPAFGERKSHYLDDIAILTGATVVREEMGMILHKTGPEVLGTATKVVITK
DTTLIVTDGSTREAVNKRVSQIQRLVENTKEEFQKKILNERIGRLSGGIAILQVGAQTQV
ELKDKQLRIEDALNATKAAIEEGVVVGGGCCLLRLSKKVDVFKELMDNEEQKIGAEIFKK
ALSYPAKLIAKNAGVNGSVVVEKVLSNANMGYGYNAARDCYEDLMKAGIMDPSKVVRCCL
EHAASVAKTFLLSDAVVVEIKESNPIPRRMPRQRPKPPLPPMPQTPQMPPMSSMPSMPPM
SMPTSGARAFGSKYGR
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggcattttctccaactcctatctctgcactatcttccaccaacccaacactgcccaaa
aggccttcttcacctttcaccactgcaaatccaaaaggcatccccaaagacctctacttt
aaccatgatggttcagccacaaagaagcttctggcaggggtgagcatggtggcagagctg
gttggggttacattgggtccaaagggaagaaatgtggtgctgcagaataagtatggacct
cccaagattgtcaatgatggtgaaactgttctcaaagagatcgaattggaggactctgtg
gagaatgtcggagttaaattggtgaggcaagctggtgcaaaaacaaatgatctggctgga
gatggttccactacagctgtaattcttgctcatggtttaattactgaaggtgtgaaggtt
actgcagctggcatgaatcccattcaaattgctcgtgggatcgagaagactgcagtggcc
ctggtatctgaactcaaattaatgtccagagagatcgaggatcacgaacttgcagatgtt
gctgcagttagtgcaggcaatgattatacagtggggaacatgatttacagtgctctttgt
caagtaggaaagaaaggtgtagtttctattgaaaaagggaagtctacagagaacactctt
caagttgtagaaggaatgcagtttgatcgcggatacttatcgccttactttgtcactgat
cgacaaaaaatgatagtggagtttcaagagtgtaagttgcttttggttgacaaaataatt
acacacccggaggagctgtttaagatattggacaatgcagtgaaagaaaagtatgcaata
gtgatagttgcagaggggattgaacaggaagctttaactccagtaataagaaacaagctc
agaggtgcactgaaggcagttgccattaaggcgcctgccttcggtgagcgcaaaagccac
tacttagacgacattgccattttgactggagcaacagtagtaagagaagagatgggaatg
atcttacataagactggcccggaggtattgggaactgctactaaggttgtgataactaag
gacactacactgatagttaccgatggaagcactcgagaagctgttaacaagagggtttct
cagatacaaaggcttgttgagaacactaaagaagaatttcaaaagaagatattaaatgaa
agaataggaagattatcaggggggattgctattctgcaggtaggggcacaaacacaagtt
gagttgaaggataaacaacttagaattgaagacgctttgaatgcaaccaaggcagcaatt
gaggaaggtgttgtagttggtggtggatgctgccttttgaggctctctaaaaaggtggat
gtcttcaaagaacttatggataatgaagaacagaagattggagcagaaatcttcaagaaa
gctctaagctatcctgcaaaactgatagctaaaaatgcaggtgtaaatggcagtgttgta
gtagagaaggttctatcaaatgctaatatggggtatggatataatgctgcaagagactgt
tatgaagacctaatgaaagctgggattatggatccatcaaaggtagttagatgttgcttg
gagcatgcagcatcagtcgcgaaaacttttctgttgtctgatgctgttgttgtcgagatt
aaggaatcaaatcccatcccaagaagaatgccgaggcaaaggccaaagccaccccttccc
cccatgccccaaacgccacaaatgccgccaatgtcatccatgccttcaatgccaccaatg
tccatgccaacctcaggtgctcgagcattcggttccaagtatggcagatga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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