KEGG   Fragaria vesca (woodland strawberry): 101296073
Entry
101296073         CDS       T02666                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03013  Nucleocytoplasmic transport
fve03015  mRNA surveillance pathway
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101296073
  09122 Translation
   03013 Nucleocytoplasmic transport
    101296073
   03015 mRNA surveillance pathway
    101296073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101296073
   03041 Spliceosome [BR:fve03041]
    101296073
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101296073
    TREX complex
     101296073
Spliceosome [BR:fve03041]
 Complex C
  Other components
   EJC/TREX
    101296073
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101296073
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 101296073
NCBI-ProteinID: XP_011461250
Position
LG3:complement(17929220..17932826)
AA seq 250 aa
MDHLNMSLDDIIKTSKKPGSGNNRGGRGRAASGPGPARRLPNRAGNRATPYGGAKAPEST
WQHDMFADQGAAYSAAPAGRASAIETGTKLYISNLDYGVSNEDIKELFVEVGDLKRYGVH
YDRSGRSKGTADVVFSRRQDAVAAVKRYNNVMLDGKPMKIEIVGTNISTPGAPLALPPAA
NGAFRNSNGAPRGGQGRGGAFNRPRGGAGRGPRRGRGGRGRGGRTGEKVSAEDLDAELEK
YHATAETMQE
NT seq 753 nt   +upstreamnt  +downstreamnt
atggatcatctaaacatgtccctcgacgacatcatcaagacctccaagaaacccggatcc
ggcaacaaccgcggcggccgcggccgggctgcctcaggtcccggacccgcccgccgcttg
cccaatcgcgccggaaatcgtgcgacgccgtacggcggcgccaaggcgccggagtccacg
tggcagcacgacatgttcgcggatcagggagcggcttacagtgcagctccggctggcaga
gcctccgccatcgaaactggaaccaagctctacatctctaatctcgactatggcgtctcc
aacgaggacatcaaggagctgtttgttgaggttggtgacctgaaacgctatggggtgcat
tacgacagaagtggcagatccaagggaaccgcagatgtagtcttctcacgaagacaggat
gctgtggctgctgttaaaagatacaacaatgtgatgcttgacgggaaaccgatgaagata
gagattgtaggaacaaacatctcaacacctggtgcgcctctcgctctgcctccagctgca
aatggtgctttcagaaattcaaatggagctccccggggtggacagggtagaggtggtgct
ttcaaccgccctcgtggtggggctggccgtggtcctagacggggccgtggtggacgtgga
agaggagggcgtactggtgaaaaggtttctgctgaagaccttgatgctgagctggagaag
taccatgcaactgcagaaacaatgcaagagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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