KEGG   Fragaria vesca (woodland strawberry): 101297781
Entry
101297781         CDS       T02666                                 
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fve04121]
    101297781
Enzymes [BR:fve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101297781
Ubiquitin system [BR:fve04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101297781
SSDB
Motif
Pfam: PA zf-RING_2 zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-ANAPC11 HTH_63 Rad50_zn_hook OppC_N ECSCR zf-RING_4 zf-RING_16 Prok-RING_4
Other DBs
NCBI-GeneID: 101297781
NCBI-ProteinID: XP_011462255
Position
LG1:complement(8476854..8483371)
AA seq 296 aa
MELRKRKMRQVLLGFSVLVFVELSSATVVYKPLSMAFADLPAKFAVRVNSSGACGALANA
DPLNACSPLRNGRRSNETEKARFALIVRGECTFKDKIQNAQNAGFAAAIVYDDKDGSDLI
SMMINGENTTIHAVFVSKATGELLKEHAHDEEGECCIFPFAKETAWTVLAISFLSFIVIL
GILLIALFAPRHWLYSQGRNQLPKSVDTKVVEALPCFTFSSARLGECHSEETCAICLENY
KDGEILKVLPCQHEFHSSCVDSWLTKWGSCCPVCKHDMRTKSVNPEIKRRTWLDNP
NT seq 891 nt   +upstreamnt  +downstreamnt
atggagctgagaaagagaaagatgaggcaagttttacttgggttctctgtgcttgtgttt
gttgagctaagctccgcaactgtggtttacaaaccactgtctatggccttcgctgacctt
cctgccaagtttgctgttcgtgtcaatagctctggtgcttgtggagctttggctaatgct
gaccctttgaatgcctgttcgcctctaaggaatgggcgccgatcaaatgaaactgagaaa
gcaaggtttgctttgatagttagaggggaatgtactttcaaggacaaaatacagaatgct
caaaatgctggttttgctgccgcaattgtttatgatgataaagatgggtcagatttaatt
tccatgatgataaacggtgagaatactacaattcatgccgtgtttgtttcaaaggcaact
ggtgaactactgaaagagcatgctcatgatgaagaaggggaatgctgtatcttcccattt
gcaaaagagacagcctggactgtgctagctatatcttttctctcattcatagtcatattg
ggtatattattaatagccttatttgctccaagacactggttgtactcacaaggaagaaac
caacttcctaaaagtgtggataccaaggtggtggaagctctaccttgcttcacatttagt
tccgctcggttgggtgaatgccacagtgaggaaacttgtgccatttgccttgagaattac
aaagatggggaaattctaaaagttcttccctgtcaacacgaatttcattcaagctgtgtg
gactcatggctgacaaaatggggctcatgctgccccgtgtgcaagcatgatatgagaaca
aaatctgtgaatcctgagatcaagagaaggacctggttggacaatccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (55)   

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