KEGG   Fragaria vesca (woodland strawberry): 101299914
Entry
101299914         CDS       T02666                                 
Name
(RefSeq) squalene synthase-like
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve00100  Steroid biosynthesis
fve00909  Sesquiterpenoid and triterpenoid biosynthesis
fve01100  Metabolic pathways
fve01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:fve00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    101299914
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    101299914
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:fve01006]
    101299914
Enzymes [BR:fve01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     101299914
Prenyltransferases [BR:fve01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   101299914
SSDB
Motif
Pfam: SQS_PSY PhoU_div
Other DBs
NCBI-GeneID: 101299914
NCBI-ProteinID: XP_004290304
Position
LG2:10894920..10902101
AA seq 413 aa
MGSFGAMLKHPDDIYPLLKLKMAARNLEKQIPPQPHWAFCYTMLHKVSRSFALVIQQLGP
ELRNAVCIFYLVLRALDTVEDDTAVETDVKLPILIAFHRHIYDPKWHFACGTKEYKVLMD
EFHHVATAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVEDYDEYCHYVAGLVGLGL
SKLFHAAELEDLATDEHSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKYEENSDKAVQCLNDMVTNSLLHIEDCLKYMSDLRDPAIFKFCAIPQVMAIGTLALC
YNNIEVFRGVVKMRRGLTAKIIDKTRTMADVYAAFYDFSSIIKSKVDKKDPNATKTLSRL
ESVQKTCRESGALTNSRKSYIIKSEQSFNSALIMVMIIILAIIYAYVSASPRF
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgggtagctttggggcgatgctgaaacacccagatgacatataccctcttttgaagttg
aaaatggcggcgaggaatctggagaagcagatccctccgcagcctcattgggctttctgc
tacaccatgcttcacaaagtctctcgcagcttcgctctcgttattcagcagctcggccct
gagctccgcaatgctgtttgtattttttatctggttcttcgagctctagacactgttgag
gatgatacagcggtagagacagatgtcaaacttcctatcctgattgctttccatcgtcac
atatatgatcccaagtggcattttgcatgtggtacgaaggagtacaaagttctcatggac
gagtttcatcatgttgcaactgcttttctggaacttgggaagggttatcaggaggcaatt
gaggatattaccaaaagaatgggggcagggatggccaagtttatctgcaaggaggtagaa
acagttgaggactatgatgagtactgccactatgtggcaggacttgttggtttaggtttg
tccaagcttttccatgctgctgagttggaagatttggctacagatgaacactcaaattca
atgggcttatttcttcagaaaacaaacattattcgagattatctggaggatattaatgaa
atacccaagtcacgcatgttttggccgcgccagatctggagtaaatatgttaacaaactc
gaggacttgaaatatgaagaaaactcagacaaggcagtgcagtgtttgaatgacatggtc
actaattctttgctacatatagaagactgcttgaagtacatgtctgatttgagagatcct
gctatatttaagttttgcgctatccctcaggtcatggcaattggcacactagcactatgc
tacaacaacattgaggtcttcagaggtgtggtgaaaatgaggcgtggtcttacagcaaaa
atcattgataaaacaagaacgatggctgacgtctatgccgctttctatgatttttcatcc
attataaagtccaaggttgacaagaaggatcccaatgcaacaaaaacattgagcaggctg
gaatcagtgcagaaaacatgcagggagtctggagcactaaccaacagcaggaaatcatat
ataatcaagagtgagcagagtttcaattcagctctgattatggtgatgattatcatattg
gccatcatttacgcttatgtctctgccagcccaagattctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system