KEGG   Fragaria vesca (woodland strawberry): 101302088
Entry
101302088         CDS       T02666                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101302088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101302088
Enzymes [BR:fve01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     101302088
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     101302088
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 PEARLI-4
Other DBs
NCBI-GeneID: 101302088
NCBI-ProteinID: XP_004302851
Position
LG6:10296450..10300732
AA seq 601 aa
MSLERSGAAPPPPQAVVGKQYGLTKPISIAGPTESDIQRTLELEKFLVEARLYESKEEAA
KREEVLHRIEQIVKDWVNQLTRLRGYMDQLVEDANALIFTFGPYRLGVHGPGAGMDTLCI
GPSYVNREEDFFFLLYNILAEMEEVTELQPVPDAHVPVMKFKFDGLSIDLCYASVSLLVV
PEDLDISDVSLLYNIDEPTVRSLNGCRDADKILKLVPNVEHFCTTLQCLRFWAKRLGVYS
SAIGFLSGVNCALLVARICELYPNAVPSLLVSRFFRIYTQWQWPNPVLLCSIGEDEHGFN
VWDPRRNPGDQTHHMPIITPAYHCKNSSYNVSKSTLRVMREQFQHGNKICEEIELNKASW
SALVEPYLFFESYKNCLQVDIVAVDVDDLRAWKGWVNSRLRKLTLMIERDTMEMLQCHPY
PQEYIDTIKQCAHSAFFMGLQRKQGKEVQDRQFDIRGTVDEFRHSIGMYNFWKPGMYIFV
SHVRRRQLPPYLFRDHVCKQSRQSRVLAQQHAHGVSGTSSGERDLKRENDLGGGLPEKPV
AIVTHKEGSASPDILDKCLTVEVVNLDKRKLSAELKPGDASDSSAIKDVSSISSVLEKIV
I
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgagcttagagaggtcgggtgctgcaccaccgcctccccaagcggtggtcggaaagcaa
tacggactgacaaagccaatttcgatagccgggccaacagaatctgatattcagagaact
ttggagttggagaagttcttggttgaagctaggctttatgaaagcaaggaggaagctgcc
aagagagaggaggttcttcaccgaattgagcagattgttaaggattgggttaaccaactt
actcggttgagaggatacatggatcaattggttgaggatgctaatgctcttatttttaca
tttggtccctataggctcggggtacatggtcctggggctggaatggacacactttgtatt
gggccatcttatgtcaaccgtgaggaagacttcttctttttattgtacaacattctggct
gaaatggaagaagtgactgaactgcaaccagttccagatgctcatgttcctgtaatgaag
tttaagtttgatggattatcaatcgacctatgttatgcaagtgtttctctgttggttgtg
ccagaagacctggacatttctgatgtatctctgttgtacaacatcgatgagcctactgtt
cgaagtcttaatggctgccgggatgctgataaaattcttaagcttgttccaaatgttgag
catttctgtacaacactccaatgcttgagattttgggcgaaaagacttggtgtttattcc
agtgctattggatttcttagtggtgtcaactgcgctcttctcgttgcccgtatttgtgaa
ctttatccgaatgcagttccaagcttgctggtttctcgattttttagaatctacacacag
tggcaatggccaaatccagtcttattatgttctataggagaggatgaacatggttttaat
gtttgggacccacgcagaaatcctggtgaccagactcatcatatgccaattataactcct
gcataccattgtaagaactctagctacaatgtctctaaaagtacccttcgtgtcatgagg
gagcagtttcagcatgggaacaagatatgtgaggaaatagaactaaataaagctagctgg
tctgctctcgttgaaccatatttgttctttgaaagctataagaactgtctccaggttgac
atagttgcagttgatgtcgatgatcttcgtgcttggaaaggctgggtgaattctcgattg
aggaaacttactctaatgattgagcgggatactatggagatgttacagtgccacccatat
cctcaagagtatattgatacaatcaaacagtgtgcacatagcgcattctttatgggtttg
cagaggaagcagggtaaagaggtgcaggatcggcagttcgatatacgagggactgttgat
gagttcaggcattccattggtatgtacaatttttggaaacctgggatgtacatttttgtt
tcacatgttcgtagaaggcaattacctccctacctgtttcgtgatcatgtttgtaaacaa
tctagacagtctagagttttggcacaacaacatgctcatggagttagtggaacgagttcc
ggtgagagagacctgaagagggagaatgatcttggtgggggtttgccagagaaaccagta
gccattgtcactcacaaagaaggaagtgcatctcctgacattttggataaatgtttaact
gtggaggtagttaatttagataaaagaaagttgtctgcagaactaaagcctggggatgcc
tcagattccagtgctattaaagatgtttctagcatcagtagtgttttagaaaaaattgtt
atatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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