KEGG   Fragaria vesca (woodland strawberry): 101302106
Entry
101302106         CDS       T02666                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03420  Nucleotide excision repair
fve04120  Ubiquitin mediated proteolysis
fve04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101302106
   04120 Ubiquitin mediated proteolysis
    101302106
  09124 Replication and repair
   03420 Nucleotide excision repair
    101302106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fve04121]
    101302106
   03400 DNA repair and recombination proteins [BR:fve03400]
    101302106
Enzymes [BR:fve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     101302106
Ubiquitin system [BR:fve04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   101302106
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     101302106
   Cul2 complex
     101302106
   Cul3 complex
     101302106
   Cul4 complex
     101302106
   Cul7 complex
     101302106
   Cul8 complex
     101302106
   Cul9 complex
     101302106
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101302106
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101302106
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 101302106
NCBI-ProteinID: XP_004306867
Position
LG7:complement(6084392..6087585)
AA seq 117 aa
MATLDSDVPMVPAGEGSSGAGSSSVKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcgacattggattccgacgtgccgatggttccggcaggcgagggctccagcggcgct
ggctcgtcttcggtgaagaagccgaagcgattcgaaatcaagaagtggaatgctgtggct
ctctgggcttgggatattgttgtggataattgtgctatatgccgaaaccatatcatggat
ctttgcattgagtgccaagcgaaccaggcaagcgcaacaagcgaggagtgcacagttgct
tggggtgtttgtaaccatgcatttcactttcactgcattagtagatggctcaagacccgc
caagtgtgcccattagataacagtgagtgggagtttcagaagtatggtcattag

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