KEGG   Fragaria vesca (woodland strawberry): 101302763
Entry
101302763         CDS       T02666                                 
Name
(RefSeq) periodic tryptophan protein 2 homolog
  KO
K14558  periodic tryptophan protein 2
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101302763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fve03009]
    101302763
Ribosome biogenesis [BR:fve03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    101302763
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 RMC1_N WDR54 WD40_like Utp21 RRM_1
Other DBs
NCBI-GeneID: 101302763
NCBI-ProteinID: XP_004302936
Position
LG6:12122501..12127138
AA seq 888 aa
MNFRFQNLLGAPYRGGNTVIVNNTELISPVGNRVSVTNLRDSTTITLPIQSSCNISRIAA
SPDGVFLLTVDDNHRCLFINLRRRVVLHRISFKTAVAAAAFSPDGGFIAVATGKVVQIWR
SPGFKKEFFPFELVKTFADCDDKVTALEWSPDSAYVLAGSKDLTARIFCIKKFKLGGVKV
KPFMFLGHRDTVVGVFFGIDKNTSKVCRVYTVARDGYVFVWGLCGDDGENEEVVSPDTPE
KDGEGNVEGVVAKKRKGYEGNDGELDKEGGYLVNRKWELLKKESFGQASMKVTACDCHRG
LDMLVVGFSKGVFALYQMPDFVCIHRLSISREKITTAVFNELGNWLTFGCAKLGQLLVWE
WRSESYILKQQGHYFDVNCVAYSPDSQLLATGADDNKVKVWNVSSGFCFVTFSEHENAIT
ALHFLANKNTLLSASLDGTVRAWDFFRYRNFKTYTTAEPRQFVSLTATQSGEVICAGTLD
TFEIFVWDMRTGNVKDILSGHEGPVHGLAFSPTDASVLASSSWDRTVRLWDVFESKGGVE
TLPHTHDILTVVYRPDGKQLACSTLEGHIHFWDPIDGLLMYTIEGRRDISGGRLMTDRRT
AANSSSGKFFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRKFQITHNLSLDGVLDFL
NSKNMTDAGPLDLIDNDDSDLEEGIDKQTRGKLGYDLPGSMPNRGRPVVRTKCLRIAPTG
RSFSAATTEGVLVYSIDDSFIFDPTDLDMDVTPEGVDAALNEEQVTKALILSLRLNEDSL
IKKCIFAVNSIDIPVVASSIPTRYLERLIEVFAHLLEKCPHLEFVLQWCQEICKAHGNSI
QQSSQKLKPALISLQKALTRTHQDLASTCDSNECMLRYLCSKRPIENS
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgaacttcaggttccagaaccttctcggagcgccgtaccggggcggcaacaccgtgatc
gtcaacaacacggagttaatctcaccggtcggtaaccgagtctccgtcaccaacctccgt
gactcgacgaccataaccctaccgatccagtcctcctgcaacatcagccgcatcgccgcc
tcccccgacggcgtcttcctcctcaccgtcgacgacaaccaccgctgcctcttcatcaac
ctccgccgccgcgtcgtgctccaccggatttccttcaagaccgccgtcgccgccgccgcg
ttcagccccgacggcggtttcatcgccgtggccaccggtaaggttgtccagatttggcgg
tcgccggggtttaagaaggagttttttccgtttgagttggttaagacttttgctgactgt
gatgataaggtgacggcgttggagtggagccccgactccgcttatgtgctggccgggtcg
aaagacttgactgctaggattttctgtattaagaagtttaaattgggaggggtgaaggtt
aagccttttatgtttttggggcatagggatacagtagttggtgtatttttcggaatcgat
aagaatactagtaaggtttgtagggtttatacggttgcgcgtgacggttatgtgtttgtt
tggggtttatgtggagatgatggtgaaaatgaggaggtagtgtctcccgatacgccggag
aaggatggtgaaggcaatgtggaaggtgttgttgcgaagaaaaggaagggttacgaggga
aatgatggggagttggataaagaaggggggtatttggtgaacagaaaatgggagttgttg
aagaaagagagttttgggcaggcctcaatgaaggtgacggcgtgtgactgtcataggggg
ctggatatgttggttgtggggttctcaaagggtgtgtttgcgctgtatcagatgccggat
tttgtgtgcattcacagattgtcgatatcgagagagaagattacaactgcggtttttaat
gagcttgggaattggctgacgtttgggtgtgcaaaacttgggcagttgcttgtttgggag
tggcggtcagagagttatatattgaagcagcaggggcattactttgatgtgaactgtgtt
gcctattcgcctgattcacaactattagccactggggcagatgataacaaagttaaggtc
tggaacgtttcttcaggattctgttttgtaacattctctgagcatgaaaatgcaatcact
gcactccactttttggctaacaaaaacacactcttaagtgcctctttggatgggactgtt
cgtgcatgggattttttccgttatcgaaattttaagacgtataccaccgcagaaccaaga
caatttgtttctttgacagcaactcagagtggtgaagtgatttgtgctggtactcttgat
acctttgagatttttgtttgggatatgaggacaggcaacgtgaaggacattcttagcggt
catgaaggtcctgttcatggtttggctttttctcctacagatgcaagtgttttagcttca
tcgtcgtgggacagaacagttcggttgtgggatgtttttgaatcaaaaggtggtgttgaa
acattaccacacacacatgatattcttacagtggtataccgcccagatggaaagcaattg
gcttgtagcacattagaaggtcatatccatttctgggacccaattgatggcttattaatg
tataccattgagggtcgtagggacatttctggtggtcgtcttatgactgatcgtagaaca
gctgccaactcaagttcaggaaagttctttacaaccttgtgttattctgctgatgggagt
tacatattagctgggggaagtagtaaatacatctgcatgtatgatgttgctgatcaggta
ttactgcggaagtttcagataactcacaatttatctttggatggagttcttgacttctta
aactcaaagaatatgacagatgctggccccctggatctaattgataatgatgacagtgat
ttggaagaaggtattgacaaacaaacccggggaaagttgggttatgatttaccagggtcc
atgcctaatcgtggaaggcctgttgttagaactaaatgcctgagaattgcaccaactggt
aggagcttctcagcagcaacaaccgagggggttctagtttattctattgatgattccttc
atctttgatccaactgatcttgacatggatgtcacgccagagggagttgatgcagcactt
aatgaagaacaagtgaccaaagctttaatccttagtctaagactaaatgaagactcttta
attaagaaatgtatttttgctgtcaattccatagacatccctgtcgttgcctcatcaatc
ccgaccagatatttggaaagattaattgaggtatttgcacatcttttagaaaaatgccca
catttggagttcgtacttcagtggtgtcaggagatctgcaaagctcatgggaactccatt
caacaaagttcccaaaaactgaagcctgctttaatatccttgcagaaagcccttacgaga
acacatcaagatttggcaagtacatgtgattccaacgaatgtatgctccgatatttatgt
tcaaaacgccctatcgagaattcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (40)   

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