KEGG   Fragaria vesca (woodland strawberry): 101304194
Entry
101304194         CDS       T02666                                 
Name
(RefSeq) polygalacturonase At1g48100
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve00040  Pentose and glucuronate interconversions
fve01100  Metabolic pathways
Module
fve_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:fve00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    101304194
Enzymes [BR:fve01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     101304194
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix End_N_terminal
Other DBs
NCBI-GeneID: 101304194
NCBI-ProteinID: XP_004300928
Position
LG5:complement(3620887..3623073)
AA seq 477 aa
MHINLKMQMKRSITSSTLLLFCVIVLVTFSITSVEARKHQTKKTKPHKHQKGGNGTHGSH
LPCPAPTPVPQDGSFSVLSFGAKGDGVSDDSKALTAAWKAACKVNGASVEIPSGFKFLIK
PITLQGPCMPNLVLQIDGTLMAPPKVGSWSKSSLFQWINFKWVHNFTIQGTGVVDGQGFD
WWSSCSSSSSSVCYLQKKSNKHIPNFKPTALRFYSSYDVIVRDIRIINSPQCHLKFDSSG
GIKVNNITISSPENSPNTDGIHLQNTQNVEIHHSTIGCGDDCVSIQTGCSNVHVHHINCG
PGHGISLGGLGKDRSVACVSNIIVNDVSFQNTLSGVRIKTWQGGIGSVKNVSFSNIQVSD
VKVPVMIDQYYCDKKSCKNQTGAVAISGVKYDQIIGTYSVQPVHLACSSDVPCTDVDLID
IQLKPSAGYQRFQHALCWNSYGKSQPPLVPSSIDYCLRRDENPVKRIARSHDHQHLC
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgcacataaatctcaaaatgcagatgaagagaagcataacttcatccactctactacta
ttttgcgtgattgttctcgtcacattttccataacttcagttgaggccagaaagcaccaa
accaagaagaccaaacctcataaacatcaaaaaggtggtaatggcactcatggttcacat
ttgccttgtcctgctccaactccagttcctcaggatggttccttttctgtcttgtctttt
ggagccaagggtgatggtgtctccgacgattctaaggcgctcacagcagcatggaaagct
gcctgcaaagtgaatggggctagtgtggaaatcccttcaggattcaagttcctcatcaag
ccaataactcttcaaggcccttgtatgcctaaccttgttcttcagatagatggaactcta
atggctcctccaaaagttggttcatggtcaaagtccagtctttttcagtggataaacttc
aaatgggttcataacttcaccatccagggcaccggagttgtcgatggccagggctttgac
tggtggagtagttgtagttcctcttcatcttcagtctgttacttgcagaagaagtccaat
aagcatatcccaaatttcaaacccacagctttgagattctattcaagctatgatgtcata
gtacgagatattagaatcatcaacagccctcagtgccatttgaaatttgacagctctgga
gggatcaaagttaacaacattaccatatcttcaccagagaatagcccaaatactgatgga
attcacttgcagaacacccaaaacgtcgaaatccatcattctactattggttgtggagat
gactgtgtatccatacaaactggctgctccaatgttcatgttcatcatatcaattgtggc
cctggccatggcataagtctaggaggacttggaaaagatagaagtgttgcttgtgtctca
aacataattgtcaatgacgtttcatttcagaacactctatcaggagtcaggatcaaaact
tggcagggaggcattgggtctgtgaagaatgtatcgttttccaatatccaagtttcggac
gtgaaggttcctgttatgatagaccagtactactgtgacaagaagtcctgcaagaaccaa
acaggagcagtagcaatttcgggtgtgaaatatgaccaaataattgggacttattcagtg
cagcctgttcatctcgcttgcagcagcgacgtgccatgcacagatgtggaccttattgat
attcagctcaagccctcagcagggtaccagagatttcagcacgctttgtgttggaactct
tatggcaagtcacaacctccattagtgccttcaagcatagactactgcttgagaagagat
gaaaatccagtcaagagaatagcaaggtcacatgatcaccagcatctgtgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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