KEGG   Fragaria vesca (woodland strawberry): 101304883
Entry
101304883         CDS       T02666                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:fve01009]
    101304883
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fve04131]
    101304883
Protein phosphatases and associated proteins [BR:fve01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101304883
Membrane trafficking [BR:fve04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    101304883
SSDB
Motif
Pfam: Vps54 Vps54_N
Other DBs
NCBI-GeneID: 101304883
NCBI-ProteinID: XP_004302131
Position
LG6:complement(1593956..1602267)
AA seq 1026 aa
MSGSNAPKRSTVTMDSTRSPHTRSNSLPDPSSSSSSTSQSLASILNNPNASDSSSSWSAW
WSSSASVAAPPEFLPLLPKSASDSLTRSDFQPYLSSISDHYNRFDDILNHLKKESLDDLD
SIGGQGEALVACLREVPALYFKEDFALEDGATFKSACPFSGAAENLVLQEKLTHYLDVVE
LHLVKEISLRSNSFFEAQGQLEDLNVKIVEGCNRIKELKETISLLDVDLVDSARQIQELN
VTRSNLLALQQKLRLILYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELTGLHCF
HHLRDRVAASIDSINSILSSDFMRASIHDAGDTDTIIISKAKARASILMNGEDGEVKLDD
EETSNYQDRLLPIIIGLLRTAKLPSVLRLYRDQLTADMKNAIKNAVAELLPILVSRPLES
DFTPGERVADADGIGASLASKLRSLSSESFVQLLSAIFLIVRAHLVRSAEVKKAIEWIMC
NLDGHYASDSVAAALAVGAVAAETAQESDGQGGLLMSYSSPRVGAKALSFQGKANDATSP
STTSKNFRADVLRENTEAVVAACDAAQGRWAKLLGVRALLHPKLRLQEFLSIYNITQEFI
TATEKVGGRPGFSIRGTLQSQAKAFLDFQHESRMTKIKAVLDQETWVEVDVPDEFQVIVT
SLFCSEESVTENLDAIHSSSETNYTEVASNNSSDAVDTGPSITEMQIKRTDSTELSMDIT
GKSKSTSADGAGKNKADVTNSVAQNNHSNMKERGKSTSQTLSYKGVGFHMVNCGLILMKM
LSEYIDMNNFFPVLSSEVVHRIVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALAS
QVISFTYAIIPELRQILFLKVPETRKAMLLSEIDRVAQDYKVHRDEIHTKLVQIMRERLL
VHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLTRTLHEVDVQAIFRQVIII
FHSQISEALSRLEISTPQAKDRLCRDVKHILGCIRSLPSDKMSESGTPNWGQLDEFLVQR
FGSEAS
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgagcggcagcaatgctcctaagagaagtacggtgacgatggactccactaggtccccc
cacacccgatccaactccctacccgacccgagctccagcagcagcagcaccagccagagc
ctcgcctccatcctcaacaaccccaatgcctccgactcctcctcctcctggtccgcctgg
tggtcctcctccgcctccgtcgccgccccgcccgaattcctccccctcctccccaaatcc
gcctccgactccctcacccgatctgacttccagccctacctctcctccatctccgatcac
tacaaccgcttcgacgacatactcaaccacctcaagaaggagagtctcgacgacctcgac
tccatcggcggccagggcgaggctctcgtcgcgtgtctccgcgaggtccccgccctctat
ttcaaggaggacttcgctctcgaagacggcgccaccttcaagtcggcgtgcccgttctcc
ggcgcggcggagaacctcgtcctgcaggagaagctgacgcattacttggacgtggtggag
cttcacctggtgaaggagatctcgctgcgatcgaactcgtttttcgaggcgcagggacag
ctggaggacttgaatgtgaagatcgtggagggatgcaatcggataaaggagctcaaggag
accatttcgctgttggatgtggatttggtggactctgctaggcagattcaggagctcaat
gttaccaggagtaatttgttggctctgcaacagaaactgaggctcattctatatgtcaat
caagctctttcggcacttaaactgcttgttgcgtctgcagattgtgctggagctttggat
gtcacagatgacctgcaacatttgctggacggggatgaacttactggtctacattgcttt
catcacctcagggatcgtgtagcagcttcaattgactccataaacagcattctgtcttca
gactttatgcgtgcttcaatacatgatgctggagatacagacactataattatatcaaaa
gcaaaagcaagagcatccatactcatgaatggggaagatggtgaagttaagttggacgat
gaagaaacctccaattatcaagatcgtcttcttccgatcatcattggattacttagaaca
gctaagctcccttctgtgttgaggctatatcgtgaccaactcacggctgatatgaagaat
gctattaagaatgcagttgcagagctgcttcccattctagtttcccgacctctggaatcc
gattttacgcctggagagcgagttgcagatgcagacggtattggtgcatcacttgcaagc
aagttgaggagcctgtcatctgaaagctttgttcaacttttaagtgctatctttctgatt
gtaagggcacatctagtacggtctgctgaagtgaagaaggctattgagtggattatgtgc
aaccttgatggtcactatgcatctgattctgtagccgctgcacttgcagttggtgctgtg
gctgcagaaacagctcaagaaagtgatggccaaggtggtttgcttatgtcgtattcatct
ccgagagttggtgcaaaggccctttctttccaaggaaaagcaaatgatgcaacaagtcct
tctactacatctaagaattttagagctgatgtgttacgagaaaacacagaagccgttgtt
gcagcatgtgatgctgctcagggaagatgggcaaagctacttggggttcgtgctcttctt
catccaaagttgagactacaggagtttttaagcatatataatatcacacaagagtttata
actgctaccgagaaggtagggggaaggccaggatttagcattaggggaacactacagtca
caggccaaagccttccttgattttcagcatgaatcacgaatgaccaagattaaggcagtt
ctagaccaagaaacgtgggtggaagtagatgttcctgatgaatttcaggttattgtcact
tcattattttgttctgaagaatcggtaactgagaacctggatgctatccatagtagttca
gaaacaaactacactgaggtggccagcaacaatagttcagatgcggtggatacaggaccg
tcgattacagaaatgcaaattaagcgaactgattcaactgaattatctatggatattact
ggaaagagtaagtctacatctgctgatggagctggaaagaataaggctgatgttacaaac
tctgtggctcagaacaaccacagcaacatgaaggagaggggaaaatcaacttcccaaacc
ctatcatataaaggtgttggttttcacatggtaaactgtggcctgatattgatgaagatg
ttgtcagagtacattgatatgaacaatttttttccagtactctcctcagaagttgttcat
cgtattgttgaaattttaaaatttttcaatacaagaacatgtcagcttgttcttggtgct
ggtgccatgcaggtatctggtctgaagtcgatcacttctaaacacttggccttggcaagt
caagtcatcagtttcacgtatgctattattcctgaactcaggcaaattctttttctgaaa
gtacctgagacaagaaaggcaatgttgctatctgaaattgatcgggttgctcaggattat
aaggttcatagagatgaaatacatacaaagctggttcagatcatgagagaaaggttattg
gttcatctacgtgggttgcctcaaattgtagagagctggaatagaccagaagatgctgac
ccacagcctagtcagtttgctcgatcacttaccaaggaagttggatacttgcaacgtgtt
ctaactcgaactttacatgaggttgatgttcaagcaattttcaggcaagtgattataatt
tttcattcacaaatttcagaagcactttcacgcttagagatcagcacaccacaagccaag
gacaggctctgtcgtgatgttaagcacattcttggatgcattcgatctttgccttctgat
aaaatgagtgaatctggtacgccaaactggggtcaactagatgaatttttggtgcagaga
tttgggtcagaagctagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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