KEGG   Fragaria vesca (woodland strawberry): 101312216
Entry
101312216         CDS       T02666                                 
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fve03009]
    101312216
Enzymes [BR:fve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101312216
Ribosome biogenesis [BR:fve03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    101312216
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT ResIII P-loop_SecA
Other DBs
NCBI-GeneID: 101312216
NCBI-ProteinID: XP_004290571
Position
LG2:complement(15273799..15280588)
AA seq 791 aa
MVVAPPKYVSSVGDLKRRELQKKKAKSGGFESLNLSPNVFKAIKRKGYKVPTPIQRKTMP
LILSGNDVVAMARTGSGKTAAFLLPMLERLKEHVPQGGVRALILSPTRDLALQTLKFTKE
LAHFMDVRISLLVGGDSMENQFEELSQNPDIIIATPGRLIHHLTEIEEMSLRSVEYVVFD
EADCLFGMGFAEQLHKILAQLSENRQTLLFSATLPSALAEFAKAGLQDPRLVRLDLDTKI
SPDLKLMFFTLRQEEKHAAILYLVREHIHSDEQTLIFVSTKHHVEFLNILFREEGIEPSV
CYGDMDHDARKIHISKFRHRKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKLFVHRVG
RAARAGRTGTAFSLVTTEDIPNLLDLHLFLSKPIRPAPTEQEVLQDMDGVMSKIDQAVAN
GESIYGRFPQTAIDLVSDRVREIIESSSELSLLLKTCSNAFRLYSKTKPSPSRESIKRAK
DLPREGLHPIFINTLKGGDLKALAFSERLKTFRPEQTILEAEGKAAKSKNVKGPASQWVD
VMKRKRAIHEGIINLVHQQNQERSNNHVEEEDGSEIIPLQKKRKKESSGSKRKATSFKDE
EYFISSIPTNQHTEAGLAVRGNENFESNRLEAAVLDLVADDNVGMRKQKSVYHWDKSGKK
YIKLNPNDRVTASGKVKTESGAKVKLEKTGMFNKWKARTHKNVSFNGTGEGNDEEATGNR
RWQGNNRGNPRGGRKKQSVPNAHVRSEIKDLDQVRKERQKKADRTSYLKSKSTKGGKKFG
GKNGKRGKAKR
NT seq 2376 nt   +upstreamnt  +downstreamnt
atggtggtggcgccgcccaagtacgtgagctcggtcggcgatctgaaacgccgcgagctg
cagaagaagaaagccaagtccggagggttcgagtctctcaatctgagccccaatgtcttc
aaagcaatcaagcgcaagggctacaaggtccccactcccatccagcgcaaaaccatgccc
ctcatcctctccggaaacgacgtcgtcgccatggcccgcactggttccggcaaaacggca
gcgtttctgctccccatgctcgagcgtttgaaggagcacgtcccccagggcggtgttagg
gctctgattctctctccaactcgagacttggcgcttcagacccttaagtttaccaaagaa
ctcgcacatttcatggacgttcgaattagtttactagttggtggtgatagcatggagaat
caatttgaggagttgtctcaaaatccggatattataattgcaactccgggtaggctgatt
caccatttgactgagattgaggagatgtcactccgctctgtggagtatgttgtgtttgat
gaggcggattgtctctttggcatgggtttcgctgagcagttgcataagattcttgcgcag
ctgagtgagaaccggcagacgctgctgtttagtgcaacgttacctagtgcgcttgccgag
tttgctaaggctggcctgcaggatcctaggcttgtgcggcttgatttggatactaagatt
agccccgacttgaagcttatgtttttcaccttgcgacaggaagagaagcatgcggcgata
ctttatttggtgagggagcatattcattctgatgagcagacgttgatatttgtatccact
aagcatcatgtggagttcctgaacatcttgtttagagaggagggcattgagccgtcggtt
tgttatggtgacatggatcacgatgctcgaaaaattcatatatcaaagtttaggcacaga
aagactatgttgttaattgtcactgatgttgcagccaggggaattgacattccattgcta
gacaatgttatcaattgggactttcccccaaagcctaaactttttgtccatagagtaggt
cgagcagcaagggctggtcggaccggtactgcgttctctcttgtgacaactgaagacata
cctaaccttttagatcttcatctgtttctttcaaaacctattaggccggcacctaccgag
caggaggttttacaggatatggatggggtaatgtccaagattgatcaagcagttgcaaat
ggagaaagtatttatgggcgtttcccccaaacagctattgatcttgtttcagacagggtt
agagagattattgaatcttcttcagaactaagccttttgctgaaaacttgctcaaatgca
ttccgcttgtattcaaagacaaagccctccccttcaagggagtctattaaaagagcaaaa
gatttacctcgggaagggctgcatccaatatttataaacacactaaagggtggagatttg
aaggcattggcattttctgaacggttgaagacattcagacctgagcagaccattctagaa
gctgaagggaaagctgccaaatcaaagaatgtgaagggtcctgctagtcagtgggtcgat
gtaatgaagagaaaaagagctatccatgaagggataatcaatctagtgcatcagcaaaat
caggaacgttctaataatcatgttgaagaggaagatggatctgagattattcccctacag
aaaaagagaaagaaagaatcttcgggttctaaaaggaaagcaacaagcttcaaggatgag
gagtactttataagttccatacccacaaatcaacatactgaagcaggactcgcggtcaga
gggaatgagaactttgagtctaataggttggaagctgctgttctagatctagttgcagat
gataatgtgggcatgaggaaacagaagtctgtatatcattgggataagagcgggaaaaag
tatattaagctaaatcctaacgaccgagtgactgctagtggcaaggtaaagacagagagt
ggtgcgaaagtaaaacttgagaaaaccggaatgttcaataagtggaaagcacgtacacac
aagaacgtatctttcaacggcactggcgaagggaatgatgaggaagccacaggcaaccgg
agatggcaggggaacaacagggggaaccctcggggaggcaggaagaaacagtctgttcct
aatgctcatgtccgttctgaaatcaaagacttggatcaagttcggaaagagaggcagaaa
aaagcagatagaacctcttatttgaagagcaaatctacaaaggggggtaaaaaatttggt
ggtaaaaatggaaaaagaggaaaggcaaagaggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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