KEGG   Fragaria vesca (woodland strawberry): 101314014
Entry
101314014         CDS       T02666                                 
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fve03016]
    101314014
Enzymes [BR:fve01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     101314014
Transfer RNA biogenesis [BR:fve03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    101314014
 Prokaryotic type
    101314014
SSDB
Motif
Pfam: Lactamase_B_4 Lactamase_B_2 Lactamase_B
Other DBs
NCBI-GeneID: 101314014
NCBI-ProteinID: XP_011466681
Position
LG6:complement(10734159..10739237)
AA seq 957 aa
MQVSNLRLLFLTPFPPLKPSFSLFPKSKPYSLLTALASSSSHPKRRRPIPYNSPRPRSKS
TFRHRDKPMEDKTESVSFNKRRADGNDKSERPKKNFPRNKRALNPTNTIAYVQFLGTGMD
TLDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIRLSKIDHIFLSRVCSETAGGIPGLLL
TLAGMGEEGMSVNVWGPSDLKFLVDAMQNFVPNAAMVHTRSFGPTHGSVGAPMADETQFA
DPIVLVDDEVVKLSAILLRPSFLEGSQRLNGVPIMHNPTKKVLDDRMDHASEHINLNSRS
ILTGKPGDMSVIYVCELPEIKGKFDPVKAKALDVRPGPKYHELQLGNSVTSDNKNIMVHP
SDVMGPSVPGPIVLLVDCPTESHFQELLSVQCLSSYYADFSGPPDNAKVVTCVIHLSPSS
LISSSNYQRWMKRFGSAQHIMAGHERKNMEIPILKASARIAARLNYLCPQFFPAPGFWSL
QDSDCLATESTPSSEGSVCENISAENLLKFTLRPYAHLGLDRSVVPSKVAAADVIYDLLS
ENPEIVDAAQCVSQFWSQSTETKEEIRFVQEDTVMVEEPWFSENTLPSCLDNIRRDDMEI
VLLGTGSSQPSKYRNVSAIHINLFSNGGLLLDCGEGTLGQLKRRYGVEGADNAVRGLRCI
WISHIHADHHTGLARILALRRTLLKGVPHEPVLVVGPRQLKSYLDAYQRLEDLDMQFLDC
RNTTDASLNAPSRATDSNKHHSSPGKDRQQKVDSTLFAKGSRMESYWKKPGSPVDDAVLS
LQKMLSEAGLEALISVPVIHCSQAFGVVLKASKRLNSVGKVIPGWKLVYSGDTRPCPALI
EASRGATILIHEATFEDGMEDEAIKKNHSTTEEAIGVGNSAGVYRVILTHFSQRYPKIPV
FDEAHMHKTCIAFDLMSINMADLPVLPKVLPYLKMLFKNEMTVDELDEILDVESVAS
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgcaagtctcaaacctccgtctcctcttcttgacccccttccctccccttaaaccctct
ttctctctcttccccaaatcaaaaccttactctctcctcaccgccctcgcctcctcctcc
tcccacccaaaacgacgccgtcccattccctacaactcccccagacccagaagcaaaagc
actttcagacaccgagacaaaccaatggaggataagaccgagtccgtttcgttcaacaag
agaagagccgacggtaacgataagagtgagaggcccaagaagaattttccgaggaacaaa
agggctctcaatcctaccaacaccatagcttatgtccagtttctagggactggaatggat
actctggatacatctccttcagtgttgctattctttgacaagcaaagatttatttttaat
gctggagagggattgcaaaggttctgcacagagcataagattagattgtcaaagatagat
cacatatttctctctcgtgtctgctcagagactgccggtggaattccaggtttgctgtta
actttggctggcatgggtgaagaaggaatgtctgtcaatgtgtggggcccatcagatctt
aagttcttggttgatgccatgcagaatttcgtcccaaatgctgctatggttcacactagg
agctttgggcccacacatggttctgtgggtgctcctatggctgatgaaactcagtttgca
gatcccattgttcttgttgacgatgaagttgtcaaattatcagccattcttctacgacca
agtttcttggaagggtctcagcgcctgaatggagtacccatcatgcacaatcctacaaaa
aaggtcctggatgataggatggatcatgcttcagaacacattaatctaaatagcagaagt
atacttactggaaagcctggcgacatgtctgtaatttatgtctgtgaattacctgaaatc
aaagggaaattcgaccctgtgaaagctaaggctttagatgttagaccagggcccaaatac
catgaactgcaacttgggaactcggtgacatcggacaacaagaacatcatggttcatcca
agtgatgtaatggggccctctgttcctggtcctattgtactccttgtcgactgcccgaca
gaatctcattttcaggagttgttatccgtacaatgtctcagtagctattatgcagatttc
tcaggtccacctgataatgctaaggttgtcacttgtgtcattcatttgagtccttcatcc
ctcataagtagttcaaactaccagagatggatgaaaagatttggttcagcccaacatatc
atggctggacatgaaaggaagaatatggagattccaattttaaaggcaagtgcacgaatt
gcagctcgacttaactatctttgtccacagttctttccagctccaggtttttggtctctt
caggacagtgattgcttagcaacagagtccactccttcaagtgagggttctgtttgtgaa
aacatttctgccgaaaaccttcttaagttcactttgcggccatatgctcatcttggatta
gataggtctgttgttccaagtaaggtggctgctgcagatgtcatctatgacttactatcc
gagaatccagagattgtagatgctgcccaatgtgttagccagttctggagtcagtccaca
gaaaccaaggaagagataaggttcgtgcaagaagatacagtaatggttgaagagccatgg
tttagtgagaatacacttcctagttgcttggacaatataaggagagatgatatggagata
gttcttctaggaactggatcgtctcagccatctaaatatcgcaatgtcagtgctatccat
ataaaccttttctccaatggaggcttgcttttagattgtggcgaaggaaccctgggacag
ctgaaaagaagatatggtgtagagggtgctgacaatgctgttagaggtcttcgatgtata
tggatttctcatattcatgctgatcaccatacggggttggcaagaatacttgctctgcga
cgtactttgttgaagggagtgcctcatgaacctgtacttgtagttggaccaaggcagctt
aagagttatttggatgcataccaaagacttgaagatttagatatgcagttccttgattgt
aggaacaccacagacgcgtctttaaatgcgccttcaagagctactgattcaaataaacat
cactcctcaccaggaaaagataggcaacagaaagtcgattccactctatttgctaaaggg
tctcgtatggagagctattggaagaaacctggtagtccagttgacgatgcagttttgagt
ttgcaaaaaatgcttagcgaagctggactggaagccttgatcagtgttcctgtcattcac
tgctcacaagcatttggtgttgtcttgaaggcttcgaagagactgaatagtgttggaaaa
gtgataccagggtggaagcttgtgtactctggtgatactaggccctgcccagcacttata
gaagcgtctcgtggtgcaacaattcttatacacgaggcaacgtttgaggatggcatggag
gatgaggccataaagaaaaaccacagcacaacagaggaagccataggagtagggaactct
gccggtgtgtaccgcgtcatccttacccacttcagccagcgatacccgaaaatcccagta
tttgacgaggcacacatgcacaagacgtgcatagcgtttgacctgatgagtattaacatg
gctgatttgccagttctgccaaaagtacttccatacttgaaaatgctctttaaaaatgag
atgacagtggatgaattagatgagatattagatgttgaaagcgttgcttcttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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